RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 WNT2P09544 360 aa14.3□□□□□ -0.12
CLN6-202ENST00000538696 TAS2R46P59540 309 aa14.3□□□□□ -0.12
CLN6-202ENST00000538696 SEC61A1P61619 476 aaKnown RBP14.3□□□□□ -0.12
CLN6-202ENST00000538696 LMO4P61968 165 aa14.3□□□□□ -0.12
CLN6-202ENST00000538696 COL10A1Q03692 680 aa14.3□□□□□ -0.12
CLN6-202ENST00000538696 RBM39Q14498 530 aaKnown RBP14.3□□□□□ -0.12
CLN6-202ENST00000538696 OR13C8Q8NGS7 320 aa14.3□□□□□ -0.12
CLN6-202ENST00000538696 NEIL1Q96FI4 390 aaPredicted RBP14.3□□□□□ -0.12
CLN6-202ENST00000538696 GINS4Q9BRT9 223 aa14.3□□□□□ -0.12
CLN6-202ENST00000538696 PPA2Q9H2U2 334 aa14.3□□□□□ -0.12
CLN6-202ENST00000538696 SEBOXQ9HB31 216 aaPredicted RBP14.3□□□□□ -0.12
CLN6-202ENST00000538696 MIOXQ9UGB7 285 aa14.3□□□□□ -0.12
CLN6-202ENST00000538696 PCDHB10Q9UN67 800 aa14.3□□□□□ -0.12
CLN6-202ENST00000538696 MAB21L2Q9Y586 359 aa14.3□□□□□ -0.12
CLN6-202ENST00000538696 ALG5Q9Y673 324 aa14.3□□□□□ -0.12
CLN6-202ENST00000538696 ITPR3Q14573 2671 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 DSCAML1Q8TD84 2053 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 TMEM82A0PJX8 343 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 TMPRSS2O15393 492 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 LOXL1Q08397 574 aaPredicted RBP14.29□□□□□ -0.12
CLN6-202ENST00000538696 RBMS2Q15434 407 aaKnown RBP14.29□□□□□ -0.12
CLN6-202ENST00000538696 TATDN3Q17R31 274 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 CHRFAM7AQ494W8 412 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 SCGB2B2Q4G0G5 96 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 IDO2Q6ZQW0 420 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 FGFRL1Q8N441 504 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 OR5AP2Q8NGF4 316 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 OR8B3Q8NGG8 313 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 OR8B2Q96RD0 313 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 BEX2Q9BXY8 128 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 BEX1Q9HBH7 125 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 ZNF286AQ9HBT8 521 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 Q9N2K0 584 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 SLC2A8Q9NY64 477 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 EHFQ9NZC4 300 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 ANXA10Q9UJ72 324 aa14.29□□□□□ -0.12
CLN6-202ENST00000538696 TRBV6-6A0A0A6YYG2 114 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 SDCBPO00560 298 aaPredicted RBP14.28□□□□□ -0.12
CLN6-202ENST00000538696 PSPNO60542 156 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 ZNF737O75373 536 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 IFNA6P05013 189 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 LMO1P25800 156 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 OR3A1P47881 315 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 OR3A3P47888 321 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 IL13RA1P78552 427 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 ATXN7L3Q14CW9 347 aaPredicted RBP14.28□□□□□ -0.12
CLN6-202ENST00000538696 CDK10Q15131 360 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 ZNF841Q6ZN19 808 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 SLC36A1Q7Z2H8 476 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 C5orf24Q7Z6I8 188 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 CIARTQ8N365 385 aaPredicted RBP14.28□□□□□ -0.12
CLN6-202ENST00000538696 ZNF561Q8N587 486 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 ZNRF1Q8ND25 227 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 MAPK1IP1LQ8NDC0 245 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 MRGPRFQ96AM1 343 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 RAB39BQ96DA2 213 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 PRRT1Q99946 306 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 ING3Q9NXR8 418 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 SCP2D1Q9UJQ7 156 aa14.28□□□□□ -0.12
CLN6-202ENST00000538696 VPS13CQ709C8 3753 aa14.27□□□□□ -0.12
CLN6-202ENST00000538696 ARHGAP32A7KAX9 2087 aa14.27□□□□□ -0.12
CLN6-202ENST00000538696 MALRD1Q5VYJ5 2156 aa14.27□□□□□ -0.12
CLN6-202ENST00000538696 FAM157AC9JC47 383 aa14.27□□□□□ -0.12
CLN6-202ENST00000538696 H7C1Q1 480 aa14.27□□□□□ -0.12
CLN6-202ENST00000538696 DVL1O14640 695 aa14.27□□□□□ -0.12
CLN6-202ENST00000538696 RAG2P55895 527 aa14.27□□□□□ -0.12
CLN6-202ENST00000538696 ARPC4P59998 168 aa14.27□□□□□ -0.12
CLN6-202ENST00000538696 ZNF880Q6PDB4 577 aa14.27□□□□□ -0.12
CLN6-202ENST00000538696 C17orf107Q6ZR85 190 aa14.27□□□□□ -0.12
CLN6-202ENST00000538696 NLRC3Q7RTR2 1065 aa14.27□□□□□ -0.12
CLN6-202ENST00000538696 ASCC1Q8N9N2 400 aaKnown RBP14.27□□□□□ -0.12
CLN6-202ENST00000538696 TMEM185AQ8NFB2 350 aa14.27□□□□□ -0.12
CLN6-202ENST00000538696 MED30Q96HR3 178 aa14.27□□□□□ -0.12
CLN6-202ENST00000538696 RIMS4Q9H426 269 aaPredicted RBP14.27□□□□□ -0.12
CLN6-202ENST00000538696 MED13LQ71F56 2210 aa14.27□□□□□ -0.13
CLN6-202ENST00000538696 NDUFB3O43676 98 aa14.26□□□□□ -0.13
CLN6-202ENST00000538696 PEX14O75381 377 aa14.26□□□□□ -0.13
CLN6-202ENST00000538696 DHFRP00374 187 aa14.26□□□□□ -0.13
CLN6-202ENST00000538696 GSTT2P0CG29 244 aa14.26□□□□□ -0.13
CLN6-202ENST00000538696 ANXA7P20073 488 aaKnown RBP14.26□□□□□ -0.13
CLN6-202ENST00000538696 ZNF497Q6ZNH5 498 aa14.26□□□□□ -0.13
CLN6-202ENST00000538696 Q6ZS49 121 aa14.26□□□□□ -0.13
CLN6-202ENST00000538696 OVCH2Q7RTZ1 564 aa14.26□□□□□ -0.13
CLN6-202ENST00000538696 GAPTQ8N292 157 aa14.26□□□□□ -0.13
CLN6-202ENST00000538696 ARRDC1Q8N5I2 433 aa14.26□□□□□ -0.13
CLN6-202ENST00000538696 CCDC107Q8WV48 283 aa14.26□□□□□ -0.13
CLN6-202ENST00000538696 GIMAP1Q8WWP7 306 aa14.26□□□□□ -0.13
CLN6-202ENST00000538696 SNX22Q96L94 193 aa14.26□□□□□ -0.13
CLN6-202ENST00000538696 VSIG4Q9Y279 399 aa14.26□□□□□ -0.13
CLN6-202ENST00000538696 CREBBPQ92793 2442 aa14.25□□□□□ -0.13
CLN6-202ENST00000538696 TRAV39A0A0B4J263 110 aa14.25□□□□□ -0.13
CLN6-202ENST00000538696 C7orf66A4D0T2 115 aa14.25□□□□□ -0.13
CLN6-202ENST00000538696 KIAA1324LA8MWY0 1029 aaPredicted RBP14.25□□□□□ -0.13
CLN6-202ENST00000538696 K7N7A8 449 aa14.25□□□□□ -0.13
CLN6-202ENST00000538696 PFDN1O60925 122 aa14.25□□□□□ -0.13
CLN6-202ENST00000538696 TK1P04183 234 aa14.25□□□□□ -0.13
CLN6-202ENST00000538696 VSIG10L2P0DP72 767 aa14.25□□□□□ -0.13
CLN6-202ENST00000538696 SRSF7Q16629 238 aaKnown RBP eCLIP14.25□□□□□ -0.13
CLN6-202ENST00000538696 WDR25Q64LD2 544 aaPredicted RBP14.25□□□□□ -0.13
CLN6-202ENST00000538696 COQ2Q96H96 371 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms