RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 LOC102724200A0A096LPH7 203 aaPredicted RBP10.73□□□□□ -0.69
USP3-203ENST00000538686 PHF1O43189 567 aaPredicted RBP10.73□□□□□ -0.69
USP3-203ENST00000538686 MPZL1O95297 269 aa10.73□□□□□ -0.69
USP3-203ENST00000538686 KITLGP21583 273 aa10.73□□□□□ -0.69
USP3-203ENST00000538686 BLVRBP30043 206 aaPredicted RBP10.73□□□□□ -0.69
USP3-203ENST00000538686 GPR1P46091 355 aa10.73□□□□□ -0.69
USP3-203ENST00000538686 SELENOVP59797 346 aa10.73□□□□□ -0.69
USP3-203ENST00000538686 ATG4DQ86TL0 474 aaPredicted RBP10.73□□□□□ -0.69
USP3-203ENST00000538686 OR10P1Q8NGE3 313 aa10.73□□□□□ -0.69
USP3-203ENST00000538686 OR2Y1Q8NGV0 311 aa10.73□□□□□ -0.69
USP3-203ENST00000538686 GUCD1Q96NT3 240 aa10.73□□□□□ -0.69
USP3-203ENST00000538686 MRPL18Q9H0U6 180 aaKnown RBP10.73□□□□□ -0.69
USP3-203ENST00000538686 SLC39A9Q9NUM3 307 aa10.73□□□□□ -0.69
USP3-203ENST00000538686 NKX2-6A6NCS4 301 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 IGLON5A6NGN9 336 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 M0R1X1 148 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 CD5LO43866 347 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 SLC16A7O60669 478 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 GOSR1O95249 250 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 EOMESO95936 686 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 ADH1BP00325 375 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 IGLC1P0CG04 106 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 ZNF823P16415 610 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 AMTP48728 403 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 RHOBP62745 196 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 ZNF154Q13106 437 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 CPEB2Q7Z5Q1 589 aaKnown RBP10.72□□□□□ -0.69
USP3-203ENST00000538686 SGMS2Q8NHU3 365 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 SIGLEC12Q96PQ1 595 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 TM2D1Q9BX74 207 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 TMEM38BQ9NVV0 291 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 POLR1DQ9Y2S0 133 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 TCF20Q9UGU0 1960 aaKnown RBP10.72□□□□□ -0.69
USP3-203ENST00000538686 SERINC4A6NH21 518 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 SLC33A1O00400 549 aaPredicted RBP10.72□□□□□ -0.69
USP3-203ENST00000538686 CEBPBP17676 345 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 ZNF10P21506 573 aaPredicted RBP10.72□□□□□ -0.69
USP3-203ENST00000538686 S100GP29377 79 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 OR3A4PP47883 348 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 RPL27P61353 136 aaKnown RBP10.72□□□□□ -0.69
USP3-203ENST00000538686 ID3Q02535 119 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 ZP4Q12836 540 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 WFDC8Q8IUA0 241 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 MTURNQ8N3F0 131 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 OR4N2Q8NGD1 307 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 OR1K1Q8NGR3 316 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 PLPPR1Q8TBJ4 325 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 BORCS7Q96B45 105 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 LIN37Q96GY3 246 aaPredicted RBP10.72□□□□□ -0.69
USP3-203ENST00000538686 SGIP1Q9BQI5 828 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 ABI3Q9P2A4 366 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 THAP10Q9P2Z0 257 aaPredicted RBP10.72□□□□□ -0.69
USP3-203ENST00000538686 B3GALT1Q9Y5Z6 326 aa10.72□□□□□ -0.69
USP3-203ENST00000538686 LOC102725191A0A1B0GVB3 256 aa10.71□□□□□ -0.69
USP3-203ENST00000538686 ODAMA1E959 279 aa10.71□□□□□ -0.69
USP3-203ENST00000538686 HCRTR1O43613 425 aa10.71□□□□□ -0.69
USP3-203ENST00000538686 SAP30O75446 220 aa10.71□□□□□ -0.69
USP3-203ENST00000538686 PPIAL4GP0DN37 164 aa10.71□□□□□ -0.69
USP3-203ENST00000538686 GPR6P46095 362 aaPredicted RBP10.71□□□□□ -0.69
USP3-203ENST00000538686 PRICKLE4Q2TBC4 344 aa10.71□□□□□ -0.69
USP3-203ENST00000538686 HLA-DRB5Q30154 266 aa10.71□□□□□ -0.69
USP3-203ENST00000538686 COX19Q49B96 90 aa10.71□□□□□ -0.69
USP3-203ENST00000538686 RSPO2Q6UXX9 243 aaPredicted RBP10.71□□□□□ -0.69
USP3-203ENST00000538686 ODF3L1Q8IXM7 274 aa10.71□□□□□ -0.69
USP3-203ENST00000538686 VN1R2Q8NFZ6 395 aa10.71□□□□□ -0.69
USP3-203ENST00000538686 OR4F5Q8NH21 305 aa10.71□□□□□ -0.69
USP3-203ENST00000538686 GPER1Q99527 375 aa10.71□□□□□ -0.69
USP3-203ENST00000538686 KLHDC3Q9BQ90 382 aa10.71□□□□□ -0.69
USP3-203ENST00000538686 FAM103A1Q9BTL3 118 aaKnown RBP10.71□□□□□ -0.69
USP3-203ENST00000538686 SPACA6W5XKT8 324 aa10.71□□□□□ -0.69
USP3-203ENST00000538686 COL4A2P08572 1712 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 M0R296 226 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 SH2D1BO14796 132 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 GALR2O43603 387 aaPredicted RBP10.7□□□□□ -0.7
USP3-203ENST00000538686 B3GALT2O43825 422 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 TTRP02766 147 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 MT-ND6P03923 174 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 OR10J4P0C629 311 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 CEACAM3P40198 252 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 CCR2P41597 374 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 PSG9Q00887 426 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 CHRDL2Q6WN34 429 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 ZNF695Q8IW36 515 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 OR4N5Q8IXE1 308 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 NUS1Q96E22 293 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 APOOQ9BUR5 198 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 SSBP4Q9BWG4 385 aaPredicted RBP10.7□□□□□ -0.7
USP3-203ENST00000538686 TMEM222Q9H0R3 208 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 FAM206AQ9NX38 181 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 TIMM9Q9Y5J7 89 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 ARID1AO14497 2285 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 MDFIC2A0A1B0GVS7 189 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 OR2T8A6NH00 312 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 ZNF850A8MQ14 1090 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 C3orf79P0CE67 100 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 SELPP16109 830 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 CMPK1P30085 196 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 DPTQ07507 201 aa10.7□□□□□ -0.7
USP3-203ENST00000538686 ELAVL3Q14576 367 aaKnown RBP10.7□□□□□ -0.7
USP3-203ENST00000538686 PHLDA2Q53GA4 152 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms