RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 EAF1Q96JC9 268 aaPredicted RBP13.17□□□□□ -0.3
PTPN6-210ENST00000538318 B9D2Q9BPU9 175 aa13.17□□□□□ -0.3
PTPN6-210ENST00000538318 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.17□□□□□ -0.3
PTPN6-210ENST00000538318 LINC01548A6NM66 108 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 NUDT19A8MXV4 375 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 C15orf65H3BRN8 121 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 CCRL2O00421 344 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 OR7C1O76099 320 aaPredicted RBP13.16□□□□□ -0.3
PTPN6-210ENST00000538318 RBM11P57052 281 aaKnown RBP13.16□□□□□ -0.3
PTPN6-210ENST00000538318 CD69Q07108 199 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 XAF1Q6GPH4 301 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 MOB3BQ86TA1 216 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 LINC00596Q86U02 117 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 TGIF2LXQ8IUE1 241 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 ZNF695Q8IW36 515 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 IZUMO1Q8IYV9 350 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 Q8N6K4 173 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 C8orf31Q8N9H6 132 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 KLHL30-AS1Q8NEE0 82 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 APH1BQ8WW43 257 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 TMEM106AQ96A25 262 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 C9orf16Q9BUW7 83 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 METTL9Q9H1A3 318 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 TMEM138Q9NPI0 162 aa13.16□□□□□ -0.3
PTPN6-210ENST00000538318 LOC100130705A0A1B0GUX0 176 aa13.15□□□□□ -0.3
PTPN6-210ENST00000538318 TMEM30CPA0ZSE6 113 aa13.15□□□□□ -0.3
PTPN6-210ENST00000538318 H0YHG0 523 aa13.15□□□□□ -0.3
PTPN6-210ENST00000538318 GEMIN2O14893 280 aaKnown RBP13.15□□□□□ -0.3
PTPN6-210ENST00000538318 ZNF93P35789 620 aaPredicted RBP13.15□□□□□ -0.3
PTPN6-210ENST00000538318 GPR12P47775 334 aa13.15□□□□□ -0.3
PTPN6-210ENST00000538318 REG1BP48304 166 aa13.15□□□□□ -0.3
PTPN6-210ENST00000538318 DCTN2Q13561 401 aaKnown RBP13.15□□□□□ -0.3
PTPN6-210ENST00000538318 RPL22L1Q6P5R6 122 aaKnown RBP13.15□□□□□ -0.3
PTPN6-210ENST00000538318 TEX38Q6PEX7 206 aa13.15□□□□□ -0.3
PTPN6-210ENST00000538318 UNQ9370/PRO34162Q6UXP9 181 aa13.15□□□□□ -0.3
PTPN6-210ENST00000538318 OR52N1Q8NH53 320 aa13.15□□□□□ -0.3
PTPN6-210ENST00000538318 ARL11Q969Q4 196 aa13.15□□□□□ -0.3
PTPN6-210ENST00000538318 SLC29A1Q99808 456 aa13.15□□□□□ -0.3
PTPN6-210ENST00000538318 ABCG5Q9H222 651 aa13.15□□□□□ -0.3
PTPN6-210ENST00000538318 FGF20Q9NP95 211 aaPredicted RBP13.15□□□□□ -0.3
PTPN6-210ENST00000538318 LIN7CQ9NUP9 197 aaKnown RBP13.15□□□□□ -0.3
PTPN6-210ENST00000538318 ING4Q9UNL4 249 aa13.15□□□□□ -0.3
PTPN6-210ENST00000538318 IGHV3-72A0A0B4J1Y9 119 aa13.14□□□□□ -0.31
PTPN6-210ENST00000538318 NCBP2LA6PVI3 153 aaKnown RBP13.14□□□□□ -0.31
PTPN6-210ENST00000538318 AP4M1O00189 453 aa13.14□□□□□ -0.31
PTPN6-210ENST00000538318 ORC5O43913 435 aa13.14□□□□□ -0.31
PTPN6-210ENST00000538318 CSTBP04080 98 aaKnown RBP13.14□□□□□ -0.31
PTPN6-210ENST00000538318 PNLIPRP3Q17RR3 467 aa13.14□□□□□ -0.31
PTPN6-210ENST00000538318 MPV17LQ2QL34 196 aa13.14□□□□□ -0.31
PTPN6-210ENST00000538318 DDI2Q5TDH0 399 aa13.14□□□□□ -0.31
PTPN6-210ENST00000538318 Q8N9W7 124 aa13.14□□□□□ -0.31
PTPN6-210ENST00000538318 TMEM104Q8NE00 496 aa13.14□□□□□ -0.31
PTPN6-210ENST00000538318 OR2T10Q8NGZ9 312 aa13.14□□□□□ -0.31
PTPN6-210ENST00000538318 ST6GALNAC6Q969X2 333 aa13.14□□□□□ -0.31
PTPN6-210ENST00000538318 RAX2Q96IS3 184 aa13.14□□□□□ -0.31
PTPN6-210ENST00000538318 GON7Q9BXV9 100 aa13.14□□□□□ -0.31
PTPN6-210ENST00000538318 PLSCR3Q9NRY6 295 aa13.14□□□□□ -0.31
PTPN6-210ENST00000538318 PAK1IP1Q9NWT1 392 aaPredicted RBP13.14□□□□□ -0.31
PTPN6-210ENST00000538318 ZMAT5Q9UDW3 170 aaKnown RBP13.14□□□□□ -0.31
PTPN6-210ENST00000538318 SDCBPO00560 298 aaPredicted RBP13.13□□□□□ -0.31
PTPN6-210ENST00000538318 ZNF780AO75290 641 aaPredicted RBP13.13□□□□□ -0.31
PTPN6-210ENST00000538318 MT-ND4P03905 459 aa13.13□□□□□ -0.31
PTPN6-210ENST00000538318 SERPINA2P20848 420 aa13.13□□□□□ -0.31
PTPN6-210ENST00000538318 CD1BP29016 333 aa13.13□□□□□ -0.31
PTPN6-210ENST00000538318 BDKRB2P30411 391 aa13.13□□□□□ -0.31
PTPN6-210ENST00000538318 ETV1P50549 477 aa13.13□□□□□ -0.31
PTPN6-210ENST00000538318 PPP3R1P63098 170 aa13.13□□□□□ -0.31
PTPN6-210ENST00000538318 Q3ZCU0 254 aa13.13□□□□□ -0.31
PTPN6-210ENST00000538318 RNF152Q8N8N0 203 aa13.13□□□□□ -0.31
PTPN6-210ENST00000538318 CCDC107Q8WV48 283 aa13.13□□□□□ -0.31
PTPN6-210ENST00000538318 RTN4IP1Q8WWV3 396 aaPredicted RBP13.13□□□□□ -0.31
PTPN6-210ENST00000538318 DUX3Q96PT4 197 aa13.13□□□□□ -0.31
PTPN6-210ENST00000538318 S100A13Q99584 98 aa13.13□□□□□ -0.31
PTPN6-210ENST00000538318 DCLRE1BQ9H816 532 aa13.13□□□□□ -0.31
PTPN6-210ENST00000538318 GFOD1Q9NXC2 390 aa13.13□□□□□ -0.31
PTPN6-210ENST00000538318 SIRT4Q9Y6E7 314 aaPredicted RBP13.13□□□□□ -0.31
PTPN6-210ENST00000538318 CCL24O00175 119 aa13.12□□□□□ -0.31
PTPN6-210ENST00000538318 OGG1O15527 345 aa13.12□□□□□ -0.31
PTPN6-210ENST00000538318 WBP4O75554 376 aaKnown RBP13.12□□□□□ -0.31
PTPN6-210ENST00000538318 RPLP1P05386 114 aaKnown RBP13.12□□□□□ -0.31
PTPN6-210ENST00000538318 GTF2F2P13984 249 aa13.12□□□□□ -0.31
PTPN6-210ENST00000538318 IL3RAP26951 378 aa13.12□□□□□ -0.31
PTPN6-210ENST00000538318 DCKP27707 260 aa13.12□□□□□ -0.31
PTPN6-210ENST00000538318 CDX1P47902 265 aaPredicted RBP13.12□□□□□ -0.31
PTPN6-210ENST00000538318 GP2P55259 537 aaKnown RBP13.12□□□□□ -0.31
PTPN6-210ENST00000538318 DGCR2P98153 550 aa13.12□□□□□ -0.31
PTPN6-210ENST00000538318 SMN1Q16637 294 aaKnown RBP13.12□□□□□ -0.31
PTPN6-210ENST00000538318 ATAD3CQ5T2N8 411 aa13.12□□□□□ -0.31
PTPN6-210ENST00000538318 OR2G6Q5TZ20 316 aa13.12□□□□□ -0.31
PTPN6-210ENST00000538318 FAM53AQ6NSI3 398 aaPredicted RBP13.12□□□□□ -0.31
PTPN6-210ENST00000538318 ZNF497Q6ZNH5 498 aa13.12□□□□□ -0.31
PTPN6-210ENST00000538318 OR8U1Q8NH10 309 aa13.12□□□□□ -0.31
PTPN6-210ENST00000538318 UBALD1Q8TB05 177 aa13.12□□□□□ -0.31
PTPN6-210ENST00000538318 ORAI1Q96D31 301 aa13.12□□□□□ -0.31
PTPN6-210ENST00000538318 WWC2-AS2Q96NR7 200 aa13.12□□□□□ -0.31
PTPN6-210ENST00000538318 RYR3Q15413 4870 aa13.11□□□□□ -0.31
PTPN6-210ENST00000538318 IGHV3-43A0A0B4J1X8 118 aa13.11□□□□□ -0.31
PTPN6-210ENST00000538318 A0A1W2PP11 408 aa13.11□□□□□ -0.31
PTPN6-210ENST00000538318 RAMP3O60896 148 aa13.11□□□□□ -0.31
PTPN6-210ENST00000538318 GPX5O75715 221 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms