RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 SAA4P35542 130 aa10.64□□□□□ -0.71
CHFR-216ENST00000538235 SERPINB10P48595 397 aa10.64□□□□□ -0.71
CHFR-216ENST00000538235 IDNKQ5T6J7 187 aa10.64□□□□□ -0.71
CHFR-216ENST00000538235 C1orf122Q6ZSJ8 110 aa10.64□□□□□ -0.71
CHFR-216ENST00000538235 TRAPPC6BQ86SZ2 158 aa10.64□□□□□ -0.71
CHFR-216ENST00000538235 ZDHHC22Q8N966 263 aa10.64□□□□□ -0.71
CHFR-216ENST00000538235 RFESDQ8TAC1 157 aa10.64□□□□□ -0.71
CHFR-216ENST00000538235 PPP1R35Q8TAP8 253 aa10.64□□□□□ -0.71
CHFR-216ENST00000538235 DUX5Q96PT3 197 aa10.64□□□□□ -0.71
CHFR-216ENST00000538235 SUCNR1Q9BXA5 334 aa10.64□□□□□ -0.71
CHFR-216ENST00000538235 RBM38Q9H0Z9 239 aaKnown RBP10.64□□□□□ -0.71
CHFR-216ENST00000538235 LINC00574Q9H8X3 128 aa10.64□□□□□ -0.71
CHFR-216ENST00000538235 UBE2J1Q9Y385 318 aaPredicted RBP10.64□□□□□ -0.71
CHFR-216ENST00000538235 TMEM30CPA0ZSE6 113 aa10.63□□□□□ -0.71
CHFR-216ENST00000538235 C12orf77C9JDV5 145 aa10.63□□□□□ -0.71
CHFR-216ENST00000538235 NPFFO15130 113 aa10.63□□□□□ -0.71
CHFR-216ENST00000538235 NAPSAO96009 420 aa10.63□□□□□ -0.71
CHFR-216ENST00000538235 IL1AP01583 271 aa10.63□□□□□ -0.71
CHFR-216ENST00000538235 DCTN2Q13561 401 aaKnown RBP10.63□□□□□ -0.71
CHFR-216ENST00000538235 GNMTQ14749 295 aa10.63□□□□□ -0.71
CHFR-216ENST00000538235 TIMM50Q3ZCQ8 353 aa10.63□□□□□ -0.71
CHFR-216ENST00000538235 ZNF880Q6PDB4 577 aa10.63□□□□□ -0.71
CHFR-216ENST00000538235 GPR141Q7Z602 305 aa10.63□□□□□ -0.71
CHFR-216ENST00000538235 OR1L1Q8NH94 360 aa10.63□□□□□ -0.71
CHFR-216ENST00000538235 NEK7Q8TDX7 302 aa10.63□□□□□ -0.71
CHFR-216ENST00000538235 RBMXL1Q96E39 390 aaKnown RBP10.63□□□□□ -0.71
CHFR-216ENST00000538235 NCOR1P1Q9H4R4 102 aa10.63□□□□□ -0.71
CHFR-216ENST00000538235 ZMAT3Q9HA38 289 aaKnown RBP10.63□□□□□ -0.71
CHFR-216ENST00000538235 MBNL3Q9NUK0 354 aaKnown RBP10.63□□□□□ -0.71
CHFR-216ENST00000538235 TRGV10A0A0A0MS01 117 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 IGHV2-26A0A0B4J1V2 119 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 IGHV3-43A0A0B4J1X8 118 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 KBTBD11-OT1A0A1B0GTJ5 212 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 ZNF729A6NN14 1252 aaPredicted RBP10.62□□□□□ -0.71
CHFR-216ENST00000538235 MCRIP1C9JLW8 97 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 ZNF701M0R085 212 aaPredicted RBP10.62□□□□□ -0.71
CHFR-216ENST00000538235 SLC31A2O15432 143 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 RBP4P02753 201 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 IGHV3-43DP0DP04 118 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 PTHLHP12272 177 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 RAB6AP20340 208 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 RANBP1P43487 201 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 KCNJ3P48549 501 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 RIPPLY3P57055 190 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 LOXL3P58215 753 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 LTC4SQ16873 150 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 GPR157Q5UAW9 335 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 ZNF626Q68DY1 528 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 HEPN1Q6WQI6 88 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 CLVS1Q8IUQ0 354 aaPredicted RBP10.62□□□□□ -0.71
CHFR-216ENST00000538235 CMTM4Q8IZR5 234 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 DTX3Q8N9I9 347 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 OR4P4Q8NGL7 312 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 SLC25A46Q96AG3 418 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 PARP12Q9H0J9 701 aaKnown RBP10.62□□□□□ -0.71
CHFR-216ENST00000538235 PRDM13Q9H4Q3 707 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 TAS2R3Q9NYW6 316 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 RAB22AQ9UL26 194 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 CEPT1Q9Y6K0 416 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 SESN1Q9Y6P5 492 aa10.62□□□□□ -0.71
CHFR-216ENST00000538235 DNHD1Q96M86 4753 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 IGKV1D-8A0A087WSZ0 117 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 A0A1W2PPE3 182 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 DNAJC9-AS1A6NH13 148 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 GNB3P16520 340 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 UBE2E1P51965 193 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 HILS1P60008 231 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 DIAPH2-AS1Q14236 149 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 KRTAP24-1Q3LI83 254 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 OR11H6Q8NGC7 330 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 OR10R2Q8NGX6 335 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 MAFIPQ8WZ33 124 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 MS4A7Q9GZW8 240 aaPredicted RBP10.61□□□□□ -0.71
CHFR-216ENST00000538235 DCSTAMPQ9H295 470 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 TMEM133Q9H2Q1 129 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 SPACA1Q9HBV2 294 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 PCDHB16Q9NRJ7 776 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 RHBDL2Q9NX52 303 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 OR6C3Q9NZP0 311 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 HSF4Q9ULV5 492 aa10.61□□□□□ -0.71
CHFR-216ENST00000538235 A0A087X0M5 115 aa10.6□□□□□ -0.71
CHFR-216ENST00000538235 IGKV1-6A0A0C4DH72 117 aa10.6□□□□□ -0.71
CHFR-216ENST00000538235 A0A1B0GX30 115 aa10.6□□□□□ -0.71
CHFR-216ENST00000538235 H3BMQ9 156 aa10.6□□□□□ -0.71
CHFR-216ENST00000538235 SSX5O60225 188 aa10.6□□□□□ -0.71
CHFR-216ENST00000538235 IGLV1-47P01700 117 aa10.6□□□□□ -0.71
CHFR-216ENST00000538235 GLAP06280 429 aa10.6□□□□□ -0.71
CHFR-216ENST00000538235 EIF4EP06730 217 aaKnown RBP10.6□□□□□ -0.71
CHFR-216ENST00000538235 MELTFP08582 738 aa10.6□□□□□ -0.71
CHFR-216ENST00000538235 HIST1H1DP16402 221 aaKnown RBP10.6□□□□□ -0.71
CHFR-216ENST00000538235 CD34P28906 385 aa10.6□□□□□ -0.71
CHFR-216ENST00000538235 HMGN3Q15651 99 aa10.6□□□□□ -0.71
CHFR-216ENST00000538235 NCR3LG1Q68D85 454 aa10.6□□□□□ -0.71
CHFR-216ENST00000538235 IZUMO1Q8IYV9 350 aa10.6□□□□□ -0.71
CHFR-216ENST00000538235 ZNF439Q8NDP4 499 aa10.6□□□□□ -0.71
CHFR-216ENST00000538235 GCDHQ92947 438 aaPredicted RBP10.6□□□□□ -0.71
CHFR-216ENST00000538235 PTX4Q96A99 478 aa10.6□□□□□ -0.71
CHFR-216ENST00000538235 NEDD4LQ96PU5 975 aa10.6□□□□□ -0.71
CHFR-216ENST00000538235 URM1Q9BTM9 101 aaKnown RBP10.6□□□□□ -0.71
CHFR-216ENST00000538235 OCEL1Q9H607 264 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 214.5 ms