RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 SPNP16150 400 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 HRH1P35367 487 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 RFX2P48378 723 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 INPP1P49441 399 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 ERVFRD-1P60508 538 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 ZNF273Q14593 569 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 HERPUD1Q15011 391 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 IGSF11Q5DX21 431 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 NLRC3Q7RTR2 1065 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 NINJ1Q92982 152 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 RIMS4Q9H426 269 aaPredicted RBP12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 CLN8Q9UBY8 286 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 EDARQ9UNE0 448 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 ZNF736B4DX44 427 aaPredicted RBP12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 C22orf46C9J442 243 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 C12orf77C9JDV5 145 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 SDCBPO00560 298 aaPredicted RBP12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 CSF1P09603 554 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 ZFP36P26651 326 aaKnown RBP12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 ERP29P30040 261 aaKnown RBP12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 RPL31P62899 125 aaKnown RBP12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 HLA-DRB3P79483 266 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 TMEM200BQ69YZ2 307 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 STEAP1BQ6NZ63 245 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 CCBE1Q6UXH8 406 aaPredicted RBP12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 BTN2A1Q7KYR7 527 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 LRRC75A-AS1Q8N1F1 130 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 ZBTB8BQ8NAP8 495 aaPredicted RBP12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 TMEM229BQ8NBD8 167 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 OR4C16Q8NGL9 310 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 OR56B4Q8NH76 319 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 OR1L1Q8NH94 360 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 RFESDQ8TAC1 157 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 C11orf54Q9H0W9 315 aaPredicted RBP12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 TAF9BQ9HBM6 251 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 ZNF286AQ9HBT8 521 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 HRASLSQ9HDD0 168 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 ANXA10Q9UJ72 324 aa12.93□□□□□ -0.34
SFSWAP-206ENST00000537582 KIAA1324LA8MWY0 1029 aaPredicted RBP12.92□□□□□ -0.34
SFSWAP-206ENST00000537582 TRDCB7Z8K6 153 aa12.92□□□□□ -0.34
SFSWAP-206ENST00000537582 FABP7O15540 132 aa12.92□□□□□ -0.34
SFSWAP-206ENST00000537582 CCL3L1P16619 93 aa12.92□□□□□ -0.34
SFSWAP-206ENST00000537582 OMGP23515 440 aa12.92□□□□□ -0.34
SFSWAP-206ENST00000537582 GNB2P62879 340 aa12.92□□□□□ -0.34
SFSWAP-206ENST00000537582 SSBP1Q04837 148 aaKnown RBP12.92□□□□□ -0.34
SFSWAP-206ENST00000537582 ASAH1Q13510 395 aa12.92□□□□□ -0.34
SFSWAP-206ENST00000537582 UTF1Q5T230 341 aa12.92□□□□□ -0.34
SFSWAP-206ENST00000537582 GLCCI1Q86VQ1 547 aa12.92□□□□□ -0.34
SFSWAP-206ENST00000537582 FAM185AQ8N0U4 392 aa12.92□□□□□ -0.34
SFSWAP-206ENST00000537582 KIRREL1Q96J84 757 aa12.92□□□□□ -0.34
SFSWAP-206ENST00000537582 SSBP3Q9BWW4 388 aaPredicted RBP12.92□□□□□ -0.34
SFSWAP-206ENST00000537582 A0A096LNT2 108 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 FAM157AC9JC47 383 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 C15orf65H3BRN8 121 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 H7C1Q1 480 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 CD74P04233 296 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 BTCP35070 178 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 DSCR9P59020 149 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 TAS2R19P59542 299 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 ARPC4P59998 168 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 LCN2P80188 198 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 HMGN3Q15651 99 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 LTC4SQ16873 150 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 C17orf58Q2M2W7 97 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 CHRFAM7AQ494W8 412 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 Q6ZS49 121 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 MAPK1IP1LQ8NDC0 245 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 OR5AP2Q8NGF4 316 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 IL1F10Q8WWZ1 152 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 OR1A1Q9P1Q5 309 aa12.91□□□□□ -0.34
SFSWAP-206ENST00000537582 BET1O15155 118 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 MMP23AO75900 390 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 RAB3DO95716 219 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 ECDO95905 644 aaPredicted RBP12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 HBZP02008 142 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 ZNF735P0CB33 412 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 AKAIN1P0CW23 69 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 CGB3P0DN86 165 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 CGB7P0DN87 165 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 GNMTQ14749 295 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 ESCO2Q56NI9 601 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 MOB1BQ7L9L4 216 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 OR5H2Q8NGV7 314 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 ARL11Q969Q4 196 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 SLC6A7Q99884 636 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 TMPRSS13Q9BYE2 586 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 LPAR2Q9HBW0 351 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 MCUBQ9NWR8 336 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 TAS2R8Q9NYW2 309 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 RPUSD1Q9UJJ7 312 aaKnown RBP12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 MALRD1Q5VYJ5 2156 aa12.9□□□□□ -0.34
SFSWAP-206ENST00000537582 TRGV10A0A0A0MS01 117 aa12.9□□□□□ -0.35
SFSWAP-206ENST00000537582 IGHV3-43A0A0B4J1X8 118 aa12.9□□□□□ -0.35
SFSWAP-206ENST00000537582 hADV38S2A0JD32 116 aa12.9□□□□□ -0.35
SFSWAP-206ENST00000537582 LYRM1O43325 122 aa12.9□□□□□ -0.35
SFSWAP-206ENST00000537582 IGHV3-43DP0DP04 118 aa12.9□□□□□ -0.35
SFSWAP-206ENST00000537582 CCR6P51684 374 aa12.9□□□□□ -0.35
SFSWAP-206ENST00000537582 DLX1P56177 255 aa12.9□□□□□ -0.35
SFSWAP-206ENST00000537582 CBX3Q13185 183 aa12.9□□□□□ -0.35
SFSWAP-206ENST00000537582 SRSF7Q16629 238 aaKnown RBP eCLIP12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms