RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 SAT2Q96F10 170 aaPredicted RBP13.27□□□□□ -0.29
MKS1-204ENST00000537529 USB1Q9BQ65 265 aaKnown RBP13.27□□□□□ -0.29
MKS1-204ENST00000537529 TRAPPC2LQ9UL33 140 aa13.27□□□□□ -0.29
MKS1-204ENST00000537529 IGHV2OR16-5A0A0B4J2B6 119 aa13.26□□□□□ -0.29
MKS1-204ENST00000537529 MLNRO43193 412 aa13.26□□□□□ -0.29
MKS1-204ENST00000537529 HAND1O96004 215 aa13.26□□□□□ -0.29
MKS1-204ENST00000537529 SEM1Q6ZVN7 128 aa13.26□□□□□ -0.29
MKS1-204ENST00000537529 BPIFCQ8NFQ6 507 aa13.26□□□□□ -0.29
MKS1-204ENST00000537529 OR5D13Q8NGL4 314 aa13.26□□□□□ -0.29
MKS1-204ENST00000537529 IL1F10Q8WWZ1 152 aa13.26□□□□□ -0.29
MKS1-204ENST00000537529 ABHD14BQ96IU4 210 aa13.26□□□□□ -0.29
MKS1-204ENST00000537529 HES4Q9HCC6 221 aa13.26□□□□□ -0.29
MKS1-204ENST00000537529 TAAR3PQ9P1P4 343 aa13.26□□□□□ -0.29
MKS1-204ENST00000537529 IGHV1-18A0A0C4DH31 117 aa13.25□□□□□ -0.29
MKS1-204ENST00000537529 IGHV3-64DA0A0J9YX35 117 aa13.25□□□□□ -0.29
MKS1-204ENST00000537529 KLK10O43240 276 aa13.25□□□□□ -0.29
MKS1-204ENST00000537529 PGLYRP1O75594 196 aaPredicted RBP13.25□□□□□ -0.29
MKS1-204ENST00000537529 CRYABP02511 175 aaKnown RBP13.25□□□□□ -0.29
MKS1-204ENST00000537529 C1QTNF12Q5T7M4 302 aa13.25□□□□□ -0.29
MKS1-204ENST00000537529 MBNL2Q5VZF2 373 aaKnown RBP13.25□□□□□ -0.29
MKS1-204ENST00000537529 OR10V1Q8NGI7 309 aa13.25□□□□□ -0.29
MKS1-204ENST00000537529 SMIM3Q9BZL3 60 aa13.25□□□□□ -0.29
MKS1-204ENST00000537529 MMP26Q9NRE1 261 aa13.25□□□□□ -0.29
MKS1-204ENST00000537529 BORCS7-ASMTA0A0B4J1R7 106 aa13.25□□□□□ -0.29
MKS1-204ENST00000537529 PVALBP20472 110 aaPredicted RBP13.25□□□□□ -0.29
MKS1-204ENST00000537529 UBAC2Q8NBM4 344 aa13.25□□□□□ -0.29
MKS1-204ENST00000537529 LILRB1Q8NHL6 650 aaPredicted RBP13.25□□□□□ -0.29
MKS1-204ENST00000537529 ERGIC1Q969X5 290 aa13.25□□□□□ -0.29
MKS1-204ENST00000537529 TLNRD1Q9H1K6 362 aa13.25□□□□□ -0.29
MKS1-204ENST00000537529 OR1A1Q9P1Q5 309 aa13.25□□□□□ -0.29
MKS1-204ENST00000537529 ERRFI1Q9UJM3 462 aaPredicted RBP13.25□□□□□ -0.29
MKS1-204ENST00000537529 WIPI2Q9Y4P8 454 aa13.25□□□□□ -0.29
MKS1-204ENST00000537529 A6NLC8 198 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 ADAM20O43506 726 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 HOXD4P09016 255 aaPredicted RBP13.24□□□□□ -0.29
MKS1-204ENST00000537529 VDAC1P21796 283 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 F2RP25116 425 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 NKX2-1P43699 371 aaPredicted RBP13.24□□□□□ -0.29
MKS1-204ENST00000537529 C1orf185Q5T7R7 199 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 IL34Q6ZMJ4 242 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 BOLLQ8N9W6 283 aaKnown RBP13.24□□□□□ -0.29
MKS1-204ENST00000537529 DMBX1Q8NFW5 382 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 SNIP1Q8TAD8 396 aaKnown RBP13.24□□□□□ -0.29
MKS1-204ENST00000537529 NARS2Q96I59 477 aaKnown RBP13.24□□□□□ -0.29
MKS1-204ENST00000537529 MBNL3Q9NUK0 354 aaKnown RBP13.24□□□□□ -0.29
MKS1-204ENST00000537529 OR14J1Q9UGF5 321 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 SLC25A15Q9Y619 301 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 EP300Q09472 2414 aaPredicted RBP13.24□□□□□ -0.29
MKS1-204ENST00000537529 TMEM30CPA0ZSE6 113 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 CLEC18AA5D8T8 446 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 HSPA12AO43301 675 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 TNFSF12O43508 249 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 WNT2P09544 360 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 SULT1A2P50226 295 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 FABP6P51161 128 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 MZT1Q08AG7 82 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 HMGN3Q15651 99 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 CLEC18CQ8NCF0 446 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 SMIM8Q96KF7 97 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 DOCK7Q96N67 2140 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 GPHA2Q96T91 129 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 ZDHHC8Q9ULC8 765 aa13.24□□□□□ -0.29
MKS1-204ENST00000537529 TRAV39A0A0B4J263 110 aa13.23□□□□□ -0.29
MKS1-204ENST00000537529 MED6O75586 246 aa13.23□□□□□ -0.29
MKS1-204ENST00000537529 BLOC1S1P78537 153 aa13.23□□□□□ -0.29
MKS1-204ENST00000537529 NMSQ5H8A3 153 aa13.23□□□□□ -0.29
MKS1-204ENST00000537529 C11orf53Q8IXP5 236 aa13.23□□□□□ -0.29
MKS1-204ENST00000537529 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.23□□□□□ -0.29
MKS1-204ENST00000537529 ARV1Q9H2C2 271 aa13.23□□□□□ -0.29
MKS1-204ENST00000537529 FZR1Q9UM11 496 aa13.23□□□□□ -0.29
MKS1-204ENST00000537529 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.22□□□□□ -0.29
MKS1-204ENST00000537529 APOC3P02656 99 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 TESK1Q15569 626 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 MST1LQ2TV78 715 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 Q6ZR03 302 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 ZNF826PQ6ZT77 177 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 PRR18Q8N4B5 295 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 RBMXL3Q8N7X1 1067 aaKnown RBP13.22□□□□□ -0.29
MKS1-204ENST00000537529 AKR1E2Q96JD6 320 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 C11orf1Q9H5F2 150 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 KCNIP1Q9NZI2 227 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 FAM215AQ9Y5M1 114 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 SHANK1Q9Y566 2161 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 FBXO24O75426 580 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 SERPINE2P07093 398 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 LMO1P25800 156 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 CEBPDP49716 269 aaPredicted RBP13.22□□□□□ -0.29
MKS1-204ENST00000537529 PXDC1Q5TGL8 231 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 PRAMEF6Q5VXH4 476 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 WDR82Q6UXN9 313 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 ACP7Q6ZNF0 438 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 PRR7Q8TB68 274 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 BSCL2Q96G97 398 aaPredicted RBP13.22□□□□□ -0.29
MKS1-204ENST00000537529 COQ3Q9NZJ6 369 aa13.22□□□□□ -0.29
MKS1-204ENST00000537529 RBM7Q9Y580 266 aaKnown RBP13.22□□□□□ -0.29
MKS1-204ENST00000537529 FAM186AA6NE01 2351 aa13.21□□□□□ -0.29
MKS1-204ENST00000537529 WNT9BO14905 357 aa13.21□□□□□ -0.29
MKS1-204ENST00000537529 VAMP2P63027 116 aa13.21□□□□□ -0.29
MKS1-204ENST00000537529 PJVKQ0ZLH3 352 aa13.21□□□□□ -0.29
MKS1-204ENST00000537529 SMIM21Q3B7S5 101 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms