RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 MYCNOSP40205 109 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 ETV1P50549 477 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 ZNF816Q0VGE8 651 aaPredicted RBP6.66□□□□□ -1.34
USP28-203ENST00000537490 SMN1Q16637 294 aaKnown RBP6.66□□□□□ -1.34
USP28-203ENST00000537490 OR2G6Q5TZ20 316 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 STPG2Q8N412 459 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 Q8N6K4 173 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 OR52N1Q8NH53 320 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 GPR148Q8TDV2 347 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 CCDC107Q8WV48 283 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 ARL11Q969Q4 196 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 TMEM106AQ96A25 262 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 CPNE2Q96FN4 548 aaPredicted RBP6.66□□□□□ -1.34
USP28-203ENST00000537490 EAF1Q96JC9 268 aaPredicted RBP6.66□□□□□ -1.34
USP28-203ENST00000537490 METTL9Q9H1A3 318 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 IFT22Q9H7X7 185 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 FGF20Q9NP95 211 aaPredicted RBP6.66□□□□□ -1.34
USP28-203ENST00000537490 FAM118AQ9NWS6 357 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 IL36GQ9NZH8 169 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 RPL36Q9Y3U8 105 aaKnown RBP6.66□□□□□ -1.34
USP28-203ENST00000537490 IGHV3-43A0A0B4J1X8 118 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 TMEM30CPA0ZSE6 113 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 NCBP2LA6PVI3 153 aaKnown RBP6.65□□□□□ -1.34
USP28-203ENST00000537490 ZNF736B4DX44 427 aaPredicted RBP6.65□□□□□ -1.34
USP28-203ENST00000537490 SDCBPO00560 298 aaPredicted RBP6.65□□□□□ -1.34
USP28-203ENST00000537490 SLC31A2O15432 143 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 OGG1O15527 345 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 WBP4O75554 376 aaKnown RBP6.65□□□□□ -1.34
USP28-203ENST00000537490 MT-ND4P03905 459 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 CSTBP04080 98 aaKnown RBP6.65□□□□□ -1.34
USP28-203ENST00000537490 CD2P06729 351 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 IGHV3-43DP0DP04 118 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 SERPINA2P20848 420 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 ZNF93P35789 620 aaPredicted RBP6.65□□□□□ -1.34
USP28-203ENST00000537490 RBM11P57052 281 aaKnown RBP6.65□□□□□ -1.34
USP28-203ENST00000537490 SLC35B1P78383 322 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 PNLIPRP3Q17RR3 467 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 KLHL22Q53GT1 634 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 NHLRC3Q5JS37 347 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 ATAD3CQ5T2N8 411 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 DDI2Q5TDH0 399 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 RPL22L1Q6P5R6 122 aaKnown RBP6.65□□□□□ -1.34
USP28-203ENST00000537490 LCNL1Q6ZST4 164 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 TGIF2LXQ8IUE1 241 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 ZNF695Q8IW36 515 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 FOXRED2Q8IWF2 684 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 LINC00311Q8N616 119 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 COMMD1Q8N668 190 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 Q8N9W7 124 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 KLHL30-AS1Q8NEE0 82 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 OR52M1Q8NGK5 317 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 OR13C5Q8NGS8 318 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 DPF1Q92782 380 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 ST6GALNAC6Q969X2 333 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 MCRIP2Q9BUT9 160 aaKnown RBP6.65□□□□□ -1.34
USP28-203ENST00000537490 C9orf16Q9BUW7 83 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 GPR61Q9BZJ8 451 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 ABCG5Q9H222 651 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 S100A14Q9HCY8 104 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 TMEM138Q9NPI0 162 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 PLSCR3Q9NRY6 295 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 GFOD1Q9NXC2 390 aa6.65□□□□□ -1.34
USP28-203ENST00000537490 MAGEA13PA6NCF6 341 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 H0YHG0 523 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 CCL24O00175 119 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 AP4M1O00189 453 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 ORC5O43913 435 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 LALBAP00709 142 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 RPLP1P05386 114 aaKnown RBP6.64□□□□□ -1.35
USP28-203ENST00000537490 VSIG8P0DPA2 414 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 IGFBP3P17936 291 aaPredicted RBP6.64□□□□□ -1.35
USP28-203ENST00000537490 DCKP27707 260 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 BDKRB2P30411 391 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 SLC6A1P30531 599 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 VHLP40337 213 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 GPR12P47775 334 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 PPP3R1P63098 170 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 CD69Q07108 199 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 MPV17LQ2QL34 196 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 SLC22A6Q4U2R8 563 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 CCDC58Q4VC31 144 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 TEX38Q6PEX7 206 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 ZNF497Q6ZNH5 498 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 IZUMO1Q8IYV9 350 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 TMEM104Q8NE00 496 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 OR2T10Q8NGZ9 312 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 RTN4IP1Q8WWV3 396 aaPredicted RBP6.64□□□□□ -1.35
USP28-203ENST00000537490 RAX2Q96IS3 184 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 CYYR1Q96J86 154 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 B9D2Q9BPU9 175 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 DCLRE1BQ9H816 532 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 LIN7CQ9NUP9 197 aaKnown RBP6.64□□□□□ -1.35
USP28-203ENST00000537490 BABAM2Q9NXR7 383 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 CLEC2DQ9UHP7 191 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 DNAH3Q8TD57 4116 aa6.64□□□□□ -1.35
USP28-203ENST00000537490 TRAV8-7A0A075B6U6 113 aa6.63□□□□□ -1.35
USP28-203ENST00000537490 TRBV5-5A0A0J9YX44 114 aa6.63□□□□□ -1.35
USP28-203ENST00000537490 AIPO00170 330 aa6.63□□□□□ -1.35
USP28-203ENST00000537490 GPX5O75715 221 aa6.63□□□□□ -1.35
USP28-203ENST00000537490 GTF2F2P13984 249 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms