RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 TMEM127O75204 238 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 CA11O75493 328 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 CLPXO76031 633 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 NAPSAO96009 420 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 GNB3P16520 340 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 RCC1P18754 421 aaPredicted RBP10.71□□□□□ -0.69
TMEM258-202ENST00000535042 COX7A1P24310 79 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 SSTR5P35346 364 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 RORCP51449 518 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 TUSC1Q2TAM9 212 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 NCR3LG1Q68D85 454 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 HEPN1Q6WQI6 88 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 RFESDQ8TAC1 157 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 BCL7BQ9BQE9 202 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 RBM38Q9H0Z9 239 aaKnown RBP10.71□□□□□ -0.69
TMEM258-202ENST00000535042 GAL3ST2Q9H3Q3 398 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 OCEL1Q9H607 264 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 LINC00574Q9H8X3 128 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 ELF5Q9UKW6 265 aaPredicted RBP10.71□□□□□ -0.69
TMEM258-202ENST00000535042 TRAPPC2LQ9UL33 140 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 SESN1Q9Y6P5 492 aa10.71□□□□□ -0.69
TMEM258-202ENST00000535042 A0A075B6Q4 140 aa10.7□□□□□ -0.7
TMEM258-202ENST00000535042 C12orf77C9JDV5 145 aa10.7□□□□□ -0.7
TMEM258-202ENST00000535042 HIST1H1DP16402 221 aaKnown RBP10.7□□□□□ -0.7
TMEM258-202ENST00000535042 GZMHP20718 246 aa10.7□□□□□ -0.7
TMEM258-202ENST00000535042 UBE2E1P51965 193 aa10.7□□□□□ -0.7
TMEM258-202ENST00000535042 FAM189A2Q15884 450 aa10.7□□□□□ -0.7
TMEM258-202ENST00000535042 FAM53AQ6NSI3 398 aaPredicted RBP10.7□□□□□ -0.7
TMEM258-202ENST00000535042 C9orf139Q6ZV77 190 aa10.7□□□□□ -0.7
TMEM258-202ENST00000535042 ARL11Q969Q4 196 aa10.7□□□□□ -0.7
TMEM258-202ENST00000535042 KCTD12Q96CX2 325 aaKnown RBP10.7□□□□□ -0.7
TMEM258-202ENST00000535042 KIRREL1Q96J84 757 aa10.7□□□□□ -0.7
TMEM258-202ENST00000535042 ZNF48Q96MX3 618 aaPredicted RBP10.7□□□□□ -0.7
TMEM258-202ENST00000535042 SLC6A7Q99884 636 aa10.7□□□□□ -0.7
TMEM258-202ENST00000535042 SUCNR1Q9BXA5 334 aa10.7□□□□□ -0.7
TMEM258-202ENST00000535042 MS4A7Q9GZW8 240 aaPredicted RBP10.7□□□□□ -0.7
TMEM258-202ENST00000535042 TMEM133Q9H2Q1 129 aa10.7□□□□□ -0.7
TMEM258-202ENST00000535042 HEXA-AS1Q9H8Q6 139 aa10.7□□□□□ -0.7
TMEM258-202ENST00000535042 MBNL3Q9NUK0 354 aaKnown RBP10.7□□□□□ -0.7
TMEM258-202ENST00000535042 IDI2-AS1Q9NZ38 188 aa10.7□□□□□ -0.7
TMEM258-202ENST00000535042 DSCAML1Q8TD84 2053 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 MDFIC2A0A1B0GVS7 189 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 FAM172BPA6NC97 362 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 NPFFO15130 113 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 ORC5O43913 435 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 ZNF182P17025 639 aaPredicted RBP10.69□□□□□ -0.7
TMEM258-202ENST00000535042 GUCA2AQ02747 115 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 LTC4SQ16873 150 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 CDNFQ49AH0 187 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 LCE2DQ5TA82 110 aaPredicted RBP10.69□□□□□ -0.7
TMEM258-202ENST00000535042 ZNF880Q6PDB4 577 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 PRIMA1Q86XR5 153 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 SAMD12Q8N8I0 201 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 DTX3Q8N9I9 347 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 OR1L1Q8NH94 360 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 DYNC2LI1Q8TCX1 351 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 C17orf50Q8WW18 174 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 AJUBAQ96IF1 538 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 CMSS1Q9BQ75 279 aaKnown RBP10.69□□□□□ -0.7
TMEM258-202ENST00000535042 ABCG5Q9H222 651 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 TAF9BQ9HBM6 251 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 ZNF286AQ9HBT8 521 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 COMMD3Q9UBI1 195 aa10.69□□□□□ -0.7
TMEM258-202ENST00000535042 SVEP1Q4LDE5 3571 aa10.68□□□□□ -0.7
TMEM258-202ENST00000535042 TRBV6-6A0A0A6YYG2 114 aa10.68□□□□□ -0.7
TMEM258-202ENST00000535042 IGHV2-26A0A0B4J1V2 119 aa10.68□□□□□ -0.7
TMEM258-202ENST00000535042 A0A0U1RQK1 487 aa10.68□□□□□ -0.7
TMEM258-202ENST00000535042 ODF3BA8MYP8 253 aa10.68□□□□□ -0.7
TMEM258-202ENST00000535042 EIF4EP06730 217 aaKnown RBP10.68□□□□□ -0.7
TMEM258-202ENST00000535042 FPR2P25090 351 aa10.68□□□□□ -0.7
TMEM258-202ENST00000535042 NFYBP25208 207 aa10.68□□□□□ -0.7
TMEM258-202ENST00000535042 SAA4P35542 130 aa10.68□□□□□ -0.7
TMEM258-202ENST00000535042 BPIFB3P59826 476 aa10.68□□□□□ -0.7
TMEM258-202ENST00000535042 DEFB112Q30KQ8 113 aa10.68□□□□□ -0.7
TMEM258-202ENST00000535042 ZNF260Q3ZCT1 412 aa10.68□□□□□ -0.7
TMEM258-202ENST00000535042 LDLRAD2Q5SZI1 272 aa10.68□□□□□ -0.7
TMEM258-202ENST00000535042 C6orf183Q5T699 404 aa10.68□□□□□ -0.7
TMEM258-202ENST00000535042 OR11H6Q8NGC7 330 aa10.68□□□□□ -0.7
TMEM258-202ENST00000535042 OR13D1Q8NGV5 346 aa10.68□□□□□ -0.7
TMEM258-202ENST00000535042 LEAP2Q969E1 77 aa10.68□□□□□ -0.7
TMEM258-202ENST00000535042 CHMP1AQ9HD42 196 aaPredicted RBP10.68□□□□□ -0.7
TMEM258-202ENST00000535042 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.68□□□□□ -0.7
TMEM258-202ENST00000535042 TRAV18A0A075B6X5 111 aa10.67□□□□□ -0.7
TMEM258-202ENST00000535042 A0A087X0M5 115 aa10.67□□□□□ -0.7
TMEM258-202ENST00000535042 IGHV3-43A0A0B4J1X8 118 aa10.67□□□□□ -0.7
TMEM258-202ENST00000535042 A0A1B0GX30 115 aa10.67□□□□□ -0.7
TMEM258-202ENST00000535042 CCDC160A6NGH7 325 aa10.67□□□□□ -0.7
TMEM258-202ENST00000535042 F2RL2O00254 374 aa10.67□□□□□ -0.7
TMEM258-202ENST00000535042 HPGDSO60760 199 aa10.67□□□□□ -0.7
TMEM258-202ENST00000535042 NOL3O60936 208 aaKnown RBP10.67□□□□□ -0.7
TMEM258-202ENST00000535042 IGHV3-7P01780 117 aa10.67□□□□□ -0.7
TMEM258-202ENST00000535042 HBZP02008 142 aa10.67□□□□□ -0.7
TMEM258-202ENST00000535042 CD3GP09693 182 aa10.67□□□□□ -0.7
TMEM258-202ENST00000535042 IGHV3-43DP0DP04 118 aa10.67□□□□□ -0.7
TMEM258-202ENST00000535042 CD34P28906 385 aa10.67□□□□□ -0.7
TMEM258-202ENST00000535042 LOXL3P58215 753 aa10.67□□□□□ -0.7
TMEM258-202ENST00000535042 DYNC1I2Q13409 638 aaKnown RBP10.67□□□□□ -0.7
TMEM258-202ENST00000535042 HMGN3Q15651 99 aa10.67□□□□□ -0.7
TMEM258-202ENST00000535042 UBE2NLQ5JXB2 153 aa10.67□□□□□ -0.7
TMEM258-202ENST00000535042 ZNF626Q68DY1 528 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms