RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 STOX2Q9P2F5 926 aaPredicted RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 SAMD4AQ9UPU9 718 aaKnown RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 STARD10Q9Y365 291 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 TIMM10BQ9Y5J6 103 aa2.62□□□□□ -1.99
USP48-215ENST00000534705 CHD3Q12873 2000 aaKnown RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 ASH1LQ9NR48 2969 aaKnown RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 SPTAN1Q13813 2472 aaKnown RBP2.62□□□□□ -1.99
USP48-215ENST00000534705 FREM1Q5H8C1 2179 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 A0A087WUJ7 227 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 NPIPA5A0A0B4J1W7 369 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 A0A1W2PQL4 384 aaPredicted RBP2.61□□□□□ -1.99
USP48-215ENST00000534705 TRAPPC13A5PLN9 417 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 LRIT2A6NDA9 550 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 A8MWP6 167 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 FAM220BPB1ANY3 271 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 C21orf140B9A014 251 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 C4orf51C9J302 202 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 NPIPA5E9PKD4 350 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 K7EM74 188 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 PHF1O43189 567 aaPredicted RBP2.61□□□□□ -1.99
USP48-215ENST00000534705 SCRG1O75711 98 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 OR2F2O95006 317 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 RAB3DO95716 219 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 C6orf47O95873 294 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 SERPINA1P01009 418 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 MT-ND4LP03901 98 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 IL5P05113 134 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 GUSBP08236 651 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 CD79AP11912 226 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 NCK1P16333 377 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 TCN2P20062 427 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 GSTM3P21266 225 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 LCN1P31025 176 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 TAS2R39P59534 338 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 RAP1BP61224 184 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 LSM6P62312 80 aaKnown RBP2.61□□□□□ -1.99
USP48-215ENST00000534705 IL5RAQ01344 420 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 EWSR1Q01844 656 aaKnown RBP eCLIP2.61□□□□□ -1.99
USP48-215ENST00000534705 PRDX1Q06830 199 aaKnown RBP2.61□□□□□ -1.99
USP48-215ENST00000534705 TNFRSF9Q07011 255 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 TPBGQ13641 420 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 ALKBH6Q3KRA9 238 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 TTLL9Q3SXZ7 439 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 GGTA1PQ4G0N0 100 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 ZNF506Q5JVG8 444 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 TMEM244Q5VVB8 128 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 MEDAGQ5VYS4 303 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 FBXW9Q5XUX1 488 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 CLEC6AQ6EIG7 209 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 HAGHLQ6PII5 290 aaPredicted RBP2.61□□□□□ -1.99
USP48-215ENST00000534705 REG3GQ6UW15 175 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 ENPP6Q6UWR7 440 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 FAM131AQ6UXB0 335 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 AHSA2Q719I0 299 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 Q71RC1 249 aaPredicted RBP2.61□□□□□ -1.99
USP48-215ENST00000534705 SLC16A14Q7RTX9 510 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 DCXRQ7Z4W1 244 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 VN1R4Q7Z5H5 301 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 TSEN54Q7Z6J9 526 aaKnown RBP2.61□□□□□ -1.99
USP48-215ENST00000534705 NAA40Q86UY6 237 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 VRK2Q86Y07 508 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 MSRB3Q8IXL7 192 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 Q8N402 240 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 LRRC18Q8N456 261 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 GATSQ8NAP1 163 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 ATP6V1C2Q8NEY4 427 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 PROKR2Q8NFJ6 384 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 BEST4Q8NFU0 473 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 OR2L5Q8NG80 312 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 OR5M1Q8NGP8 315 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 OR56B4Q8NH76 319 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 TYMSOSQ8TAI1 123 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 RHEBL1Q8TAI7 183 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 DTD1Q8TEA8 209 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 PCNPQ8WW12 178 aaKnown RBP2.61□□□□□ -1.99
USP48-215ENST00000534705 TCTEX1D2Q8WW35 142 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 HIST1H2BAQ96A08 127 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 PHYHIPLQ96FC7 376 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 DIRAS2Q96HU8 199 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 OR2A5Q96R48 311 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 DERL2Q9GZP9 239 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 CCDC90BQ9GZT6 254 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 COMMD4Q9H0A8 199 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 TOLLIPQ9H0E2 274 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 SLITRK2Q9H156 845 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 GAL3ST2Q9H3Q3 398 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 ALG9Q9H6U8 611 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 ANKRA2Q9H9E1 313 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 ZNF226Q9NYT6 803 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 TAS2R13Q9NYV9 303 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 AHSPQ9NZD4 102 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 DHCR7Q9UBM7 475 aaKnown RBP2.61□□□□□ -1.99
USP48-215ENST00000534705 RASD1Q9Y272 281 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 POFUT2Q9Y2G5 429 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 POLDIP2Q9Y2S7 368 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 KLHDC2Q9Y2U9 406 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 MMACHCQ9Y4U1 282 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 CSDC2Q9Y534 153 aaKnown RBP2.61□□□□□ -1.99
USP48-215ENST00000534705 DNAJC15Q9Y5T4 150 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 USP9YO00507 2555 aaPredicted RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms