RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 HILPDAQ9Y5L2 63 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 CUBNO60494 3623 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 LANCL1O43813 399 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 MT-ND4P03905 459 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 CDK1P06493 297 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 SOX2P48431 317 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 PSMD7P51665 324 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 GTF2A1P52655 376 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-217ENST00000534699 HTD2P86397 168 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 DEFA6Q01524 100 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 SCN1BQ07699 218 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 OR2G6Q5TZ20 316 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 MOB1BQ7L9L4 216 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 OR51D1Q8NGF3 324 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 OR5D18Q8NGL1 313 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 OR13A1Q8NGR1 328 aa8.31□□□□□ -1.08
CSDE1-217ENST00000534699 MCRIP2Q9BUT9 160 aaKnown RBP8.31□□□□□ -1.08
CSDE1-217ENST00000534699 PPIL3Q9H2H8 161 aaKnown RBP8.31□□□□□ -1.08
CSDE1-217ENST00000534699 C15orf65H3BRN8 121 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 MMP23AO75900 390 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 VSIG10L2P0DP72 767 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 FUT3P21217 361 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 OR3A4PP47883 348 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 ATXN7L3Q14CW9 347 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-217ENST00000534699 OR2W3Q7Z3T1 314 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 BATF2Q8N1L9 274 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 OR2T10Q8NGZ9 312 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 MRGPRDQ8TDS7 321 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 SPACA5Q96QH8 159 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 FAM192AQ9GZU8 254 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 MBNL3Q9NUK0 354 aaKnown RBP8.3□□□□□ -1.08
CSDE1-217ENST00000534699 TRBV6-6A0A0A6YYG2 114 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 H3BSH0 61 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 SLC35B1P78383 322 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 SMN1Q16637 294 aaKnown RBP8.3□□□□□ -1.08
CSDE1-217ENST00000534699 TGIF2LXQ8IUE1 241 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 TPRX1Q8N7U7 411 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 PLPPR1Q8TBJ4 325 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 RCC1LQ96I51 464 aaKnown RBP8.3□□□□□ -1.08
CSDE1-217ENST00000534699 NKX3-1Q99801 234 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-217ENST00000534699 LIN7CQ9NUP9 197 aaKnown RBP8.3□□□□□ -1.08
CSDE1-217ENST00000534699 KCNIP1Q9NZI2 227 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 JPT1Q9UK76 154 aa8.3□□□□□ -1.08
CSDE1-217ENST00000534699 A0A1W2PPI3 338 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 H0YHG0 523 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 OR7C1O76099 320 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-217ENST00000534699 GDNFP39905 211 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 SNU13P55769 128 aaKnown RBP8.29□□□□□ -1.08
CSDE1-217ENST00000534699 SRSF4Q08170 494 aaKnown RBP8.29□□□□□ -1.08
CSDE1-217ENST00000534699 CENPVQ7Z7K6 275 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-217ENST00000534699 Q96M66 194 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 TM2D1Q9BX74 207 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 AASSQ9UDR5 926 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 PSG11Q9UQ72 335 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 SIRT4Q9Y6E7 314 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-217ENST00000534699 AIPO00170 330 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 PDCD6O75340 191 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 GALP22466 123 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 PRB3Q04118 309 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-217ENST00000534699 IRF3Q14653 427 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 FBLN7Q53RD9 439 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 C6orf141Q5SZD1 244 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 SLC25A48Q6ZT89 311 aaKnown RBP8.29□□□□□ -1.08
CSDE1-217ENST00000534699 FOXRED2Q8IWF2 684 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 Q8N6K4 173 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 OR5AU1Q8NGC0 362 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 OR10X1Q8NGY0 326 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 KCNG3Q8TAE7 436 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 ST6GALNAC6Q969X2 333 aa8.29□□□□□ -1.08
CSDE1-217ENST00000534699 NR1H4Q96RI1 486 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-217ENST00000534699 ADARB2-AS1A8MUL3 147 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 DIRAS3O95661 229 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 IGHG2P01859 326 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 PIGYQ3MUY2 71 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 GLIPR1L1Q6UWM5 242 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 ARL11Q969Q4 196 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 NECAP2Q9NVZ3 263 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 SDCBPO00560 298 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-217ENST00000534699 ARPC1BO15143 372 aaKnown RBP8.28□□□□□ -1.08
CSDE1-217ENST00000534699 YPEL1O60688 119 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 ARL6IP5O75915 188 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 TMEM11P17152 192 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 SERPINA2P20848 420 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 NFYBP25208 207 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 LOXL3P58215 753 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 TPBGQ13641 420 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 AWAT2Q6E213 333 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 XAF1Q6GPH4 301 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 C5orf56Q8N8D9 126 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 RNF152Q8N8N0 203 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 ZNF439Q8NDP4 499 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 YPEL2Q96QA6 119 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 RNF5Q99942 180 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 ETAA1Q9NY74 926 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 CLEC2DQ9UHP7 191 aa8.28□□□□□ -1.08
CSDE1-217ENST00000534699 HSD17B6O14756 317 aa8.27□□□□□ -1.08
CSDE1-217ENST00000534699 GEMIN2O14893 280 aaKnown RBP8.27□□□□□ -1.08
CSDE1-217ENST00000534699 LALBAP00709 142 aa8.27□□□□□ -1.08
CSDE1-217ENST00000534699 OR5H8P0DN80 308 aa8.27□□□□□ -1.08
CSDE1-217ENST00000534699 CD28P10747 220 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms