RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 PCDHB16Q9NRJ7 776 aa11.22□□□□□ -0.61
SF3B2-215ENST00000534307 MRPS28Q9Y2Q9 187 aaKnown RBP11.22□□□□□ -0.61
SF3B2-215ENST00000534307 LSM2Q9Y333 95 aaKnown RBP11.22□□□□□ -0.61
SF3B2-215ENST00000534307 A0A1W2PPI3 338 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 FBXO24O75426 580 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 IGHV3-7P01780 117 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 GZMHP20718 246 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 ARHGDIBP52566 201 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 GP2P55259 537 aaKnown RBP11.21□□□□□ -0.61
SF3B2-215ENST00000534307 DIAPH2-AS1Q14236 149 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 RBM39Q14498 530 aaKnown RBP11.21□□□□□ -0.61
SF3B2-215ENST00000534307 C6orf141Q5SZD1 244 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 GLIPR1L1Q6UWM5 242 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 UNQ9370/PRO34162Q6UXP9 181 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 GAPTQ8N292 157 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 JAGN1Q8N5M9 183 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 TMEM104Q8NE00 496 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 SGCDQ92629 289 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 THRSPQ92748 146 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 AKR1E2Q96JD6 320 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 VCX3BQ9H321 246 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 ERGIC3Q9Y282 383 aa11.21□□□□□ -0.61
SF3B2-215ENST00000534307 AMMECR1Q9Y4X0 333 aaPredicted RBP11.21□□□□□ -0.61
SF3B2-215ENST00000534307 TENM3Q9P273 2699 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 H3BUI4 141 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 SC5DO75845 299 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 MT-ND4P03905 459 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 MAS1P04201 325 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 MAPK3P27361 379 aaPredicted RBP11.2□□□□□ -0.62
SF3B2-215ENST00000534307 MNDAP41218 407 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 VDAC2P45880 294 aaPredicted RBP11.2□□□□□ -0.62
SF3B2-215ENST00000534307 LOXL3P58215 753 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 MADCAM1Q13477 382 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 INSL4Q14641 139 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 IRF3Q14653 427 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 LTC4SQ16873 150 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 ATAD3CQ5T2N8 411 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 NDUFA11Q86Y39 141 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 THNSL2Q86YJ6 484 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 C1QL4Q86Z23 238 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 NKAIN3Q8N8D7 197 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 TOMM40LQ969M1 308 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 RPEQ96AT9 228 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 OR5M11Q96RB7 305 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 CITED2Q99967 270 aaPredicted RBP11.2□□□□□ -0.62
SF3B2-215ENST00000534307 UQCC2Q9BRT2 126 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 MND1Q9BWT6 205 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 SPACA1Q9HBV2 294 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 PLXNB1O43157 2135 aa11.2□□□□□ -0.62
SF3B2-215ENST00000534307 FAM90A10PA6NDY2 464 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 FAM90A7PA6NKC0 464 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 FAM90A23PA8MXZ1 464 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 ORC5O43913 435 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 MGMTP16455 207 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 SLC35A2P78381 396 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 ABCA11PQ4W5N1 156 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 FAM27D1Q5T7N8 215 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 AWAT2Q6E213 333 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 SIGIRRQ6IA17 410 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 FAM53AQ6NSI3 398 aaPredicted RBP11.19□□□□□ -0.62
SF3B2-215ENST00000534307 LYG1Q8N1E2 194 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 LINC00311Q8N616 119 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 C8orf31Q8N9H6 132 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 OR52M1Q8NGK5 317 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 OR56B4Q8NH76 319 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 CYYR1Q96J86 154 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 Q96M66 194 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 BANF2Q9H503 90 aa11.19□□□□□ -0.62
SF3B2-215ENST00000534307 A0A1W2PPE3 182 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 PTGES3LE9PB15 166 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 M0QZK8 103 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 AIPO00170 330 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 LPLP06858 475 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 SNRNP70P08621 437 aaKnown RBP11.18□□□□□ -0.62
SF3B2-215ENST00000534307 FAM106CPP0CH98 169 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 CD37P11049 281 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 GNG10P50151 68 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 RAB7AP51149 207 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 CD83Q01151 205 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 SPHARQ15513 63 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 ACSM3Q53FZ2 586 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 TCTEX1D4Q5JR98 221 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 RAB12Q6IQ22 244 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 LRRTM1Q86UE6 522 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 OR8H3Q8N146 312 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 MS4A15Q8N5U1 240 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 DRAM1Q8N682 238 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 CCDC107Q8WV48 283 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 MYDGFQ969H8 173 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 ARL11Q969Q4 196 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 GFOD1Q9NXC2 390 aa11.18□□□□□ -0.62
SF3B2-215ENST00000534307 SH2D7A6NKC9 451 aaPredicted RBP11.17□□□□□ -0.62
SF3B2-215ENST00000534307 C12orf77C9JDV5 145 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 MCRIP1C9JLW8 97 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 PEX14O75381 377 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 ATP6V1G2O95670 118 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 GLAP06280 429 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 MYF6P23409 242 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 VHLP40337 213 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 EMX1Q04741 257 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms