RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 LOXL3P58215 753 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 MED21Q13503 144 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 MPV17LQ2QL34 196 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 Q499Y3 187 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 SLC22A6Q4U2R8 563 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 YIF1BQ5BJH7 314 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 KHDC1LQ5JSQ8 128 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 FOXB2Q5VYV0 432 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 DMKNQ6E0U4 476 aaPredicted RBP7.08□□□□□ -1.28
COPB1-211ENST00000534234 ZNF329Q86UD4 541 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 OR8H3Q8N146 312 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 DHRSXQ8N5I4 330 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 SETD9Q8NE22 299 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 MRAPQ8TCY5 172 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 NEK7Q8TDX7 302 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 CCDC107Q8WV48 283 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 GGHQ92820 318 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 ARL11Q969Q4 196 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 CKLFQ9UBR5 152 aa7.08□□□□□ -1.28
COPB1-211ENST00000534234 CMYA5Q8N3K9 4069 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 TRAV8-7A0A075B6U6 113 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 TRBV5-5A0A0J9YX44 114 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 A0A1W2PP11 408 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 A0A1W2PPK0 400 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 PSMB11A5LHX3 300 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 PIN1P1O15428 100 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 IGKV1D-33P01593 117 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 IGKV1-33P01594 117 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 MT-ND4P03905 459 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 GAPDHP04406 335 aaKnown RBP7.07□□□□□ -1.28
COPB1-211ENST00000534234 RPS11P62280 158 aaKnown RBP eCLIP7.07□□□□□ -1.28
COPB1-211ENST00000534234 ADARB1P78563 741 aaKnown RBP7.07□□□□□ -1.28
COPB1-211ENST00000534234 ST3GAL4Q11206 333 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 GPR176Q14439 515 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 MOB3BQ86TA1 216 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 LINC00596Q86U02 117 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 ZFP41Q8N8Y5 198 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 ZNF485Q8NCK3 441 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 OR52M1Q8NGK5 317 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 UBALD1Q8TB05 177 aa7.07□□□□□ -1.28
COPB1-211ENST00000534234 AURKAIP1Q9NWT8 199 aaPredicted RBP7.07□□□□□ -1.28
COPB1-211ENST00000534234 IGHV1-3A0A0C4DH29 117 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 MAGEA13PA6NCF6 341 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 SERPINE3A8MV23 424 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 MCRIP1C9JLW8 97 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 C15orf65H3BRN8 121 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 CCRL2O00421 344 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 SDCBPO00560 298 aaPredicted RBP7.06□□□□□ -1.28
COPB1-211ENST00000534234 HSD17B6O14756 317 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 FGF16O43320 207 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 ORC5O43913 435 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 REG1BP48304 166 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 ZNF816Q0VGE8 651 aaPredicted RBP7.06□□□□□ -1.28
COPB1-211ENST00000534234 GLIPR1L1Q6UWM5 242 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 STX19Q8N4C7 294 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 JAGN1Q8N5M9 183 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 PACRGLQ8N7B6 248 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 C5orf56Q8N8D9 126 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 CHPT1Q8WUD6 406 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 MUL1Q969V5 352 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 PGLYRP3Q96LB9 341 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 NOL4LQ96MY1 436 aaPredicted RBP7.06□□□□□ -1.28
COPB1-211ENST00000534234 OR14A2Q96R54 314 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 SPACA1Q9HBV2 294 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 C8orf4Q9NR00 106 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 LINC00527Q9UJ94 153 aa7.06□□□□□ -1.28
COPB1-211ENST00000534234 MRPS28Q9Y2Q9 187 aaKnown RBP7.06□□□□□ -1.28
COPB1-211ENST00000534234 TRBV5-7A0A0A0MS05 114 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 IGHV3-43A0A0B4J1X8 118 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 IGHV3-72A0A0B4J1Y9 119 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 PNMA8CA0A1B0GUJ8 204 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 EFCAB10A6NFE3 127 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 NCBP2LA6PVI3 153 aaKnown RBP7.05□□□□□ -1.28
COPB1-211ENST00000534234 AIPO00170 330 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 MAS1P04201 325 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 IGHV3-43DP0DP04 118 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 CELP19835 753 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 TAS2R43P59537 309 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 SLC35A2P78381 396 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 EBI3Q14213 229 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 SYT6Q5T7P8 510 aaPredicted RBP7.05□□□□□ -1.28
COPB1-211ENST00000534234 FAM53AQ6NSI3 398 aaPredicted RBP7.05□□□□□ -1.28
COPB1-211ENST00000534234 ZNF497Q6ZNH5 498 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 SLC35E3Q7Z769 313 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 CDH26Q8IXH8 852 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 LINC00311Q8N616 119 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 MRPS24Q96EL2 167 aaKnown RBP7.05□□□□□ -1.28
COPB1-211ENST00000534234 RCC1LQ96I51 464 aaKnown RBP7.05□□□□□ -1.28
COPB1-211ENST00000534234 EAF1Q96JC9 268 aaPredicted RBP7.05□□□□□ -1.28
COPB1-211ENST00000534234 GFOD1Q9NXC2 390 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 TRAPPC2LQ9UL33 140 aa7.05□□□□□ -1.28
COPB1-211ENST00000534234 LINC01548A6NM66 108 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 SPINT2O43291 252 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 DUS4LO95620 317 aaKnown RBP7.04□□□□□ -1.28
COPB1-211ENST00000534234 MPIG6BO95866 241 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 IGHG2P01859 326 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 GNAO1P09471 354 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 FSTP19883 344 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 CAPGP40121 348 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 SLC35B1P78383 322 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms