RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 A0A1W2PPK0 400 aa17.84■□□□□ 0.45
BEST1-207ENST00000533521 M0QZK8 103 aa17.84■□□□□ 0.45
BEST1-207ENST00000533521 OR2F2O95006 317 aa17.84■□□□□ 0.45
BEST1-207ENST00000533521 MT-ND4P03905 459 aa17.84■□□□□ 0.45
BEST1-207ENST00000533521 CSF1P09603 554 aa17.84■□□□□ 0.45
BEST1-207ENST00000533521 CD37P11049 281 aa17.84■□□□□ 0.45
BEST1-207ENST00000533521 JUNBP17275 347 aaPredicted RBP17.84■□□□□ 0.45
BEST1-207ENST00000533521 MADCAM1Q13477 382 aa17.84■□□□□ 0.45
BEST1-207ENST00000533521 ACSM3Q53FZ2 586 aa17.84■□□□□ 0.45
BEST1-207ENST00000533521 RBM14Q96PK6 669 aaKnown RBP17.84■□□□□ 0.45
BEST1-207ENST00000533521 ISYNA1Q9NPH2 558 aa17.84■□□□□ 0.45
BEST1-207ENST00000533521 ZNF581Q9P0T4 197 aa17.84■□□□□ 0.45
BEST1-207ENST00000533521 PSG11Q9UQ72 335 aa17.84■□□□□ 0.45
BEST1-207ENST00000533521 NOTCH1P46531 2555 aa17.84■□□□□ 0.45
BEST1-207ENST00000533521 A0A1W2PP11 408 aa17.83■□□□□ 0.44
BEST1-207ENST00000533521 FAM172BPA6NC97 362 aa17.83■□□□□ 0.44
BEST1-207ENST00000533521 FAM90A9PA6NNJ1 464 aa17.83■□□□□ 0.44
BEST1-207ENST00000533521 MCRIP1C9JLW8 97 aa17.83■□□□□ 0.44
BEST1-207ENST00000533521 C15orf65H3BRN8 121 aa17.83■□□□□ 0.44
BEST1-207ENST00000533521 SC5DO75845 299 aa17.83■□□□□ 0.44
BEST1-207ENST00000533521 MAS1P04201 325 aa17.83■□□□□ 0.44
BEST1-207ENST00000533521 UBBP0CG47 229 aa17.83■□□□□ 0.44
BEST1-207ENST00000533521 RAB7AP51149 207 aa17.83■□□□□ 0.44
BEST1-207ENST00000533521 BLCAPP62952 87 aa17.83■□□□□ 0.44
BEST1-207ENST00000533521 ATAD3CQ5T2N8 411 aa17.83■□□□□ 0.44
BEST1-207ENST00000533521 AWAT2Q6E213 333 aa17.83■□□□□ 0.44
BEST1-207ENST00000533521 OR8H3Q8N146 312 aa17.83■□□□□ 0.44
BEST1-207ENST00000533521 CAPSLQ8WWF8 208 aa17.83■□□□□ 0.44
BEST1-207ENST00000533521 RPEQ96AT9 228 aa17.83■□□□□ 0.44
BEST1-207ENST00000533521 CMYA5Q8N3K9 4069 aa17.82■□□□□ 0.44
BEST1-207ENST00000533521 TSPAN15O95858 294 aa17.82■□□□□ 0.44
BEST1-207ENST00000533521 FAM106CPP0CH98 169 aa17.82■□□□□ 0.44
BEST1-207ENST00000533521 VSIG10L2P0DP72 767 aa17.82■□□□□ 0.44
BEST1-207ENST00000533521 SSTR5P35346 364 aa17.82■□□□□ 0.44
BEST1-207ENST00000533521 HSPA13P48723 471 aa17.82■□□□□ 0.44
BEST1-207ENST00000533521 ZNF554Q86TJ5 538 aa17.82■□□□□ 0.44
BEST1-207ENST00000533521 LINC00311Q8N616 119 aa17.82■□□□□ 0.44
BEST1-207ENST00000533521 Q96M66 194 aa17.82■□□□□ 0.44
BEST1-207ENST00000533521 OR5M11Q96RB7 305 aa17.82■□□□□ 0.44
BEST1-207ENST00000533521 OCSTAMPQ9BR26 566 aa17.82■□□□□ 0.44
BEST1-207ENST00000533521 MGMTP16455 207 aa17.81■□□□□ 0.44
BEST1-207ENST00000533521 FUT3P21217 361 aa17.81■□□□□ 0.44
BEST1-207ENST00000533521 GP2P55259 537 aaKnown RBP17.81■□□□□ 0.44
BEST1-207ENST00000533521 EMX1Q04741 257 aaPredicted RBP17.81■□□□□ 0.44
BEST1-207ENST00000533521 TPBGQ13641 420 aa17.81■□□□□ 0.44
BEST1-207ENST00000533521 TRAM1Q15629 374 aa17.81■□□□□ 0.44
BEST1-207ENST00000533521 C1orf100Q5SVJ3 147 aa17.81■□□□□ 0.44
BEST1-207ENST00000533521 UTF1Q5T230 341 aa17.81■□□□□ 0.44
BEST1-207ENST00000533521 TRAT1Q6PIZ9 186 aa17.81■□□□□ 0.44
BEST1-207ENST00000533521 RFESDQ8TAC1 157 aa17.81■□□□□ 0.44
BEST1-207ENST00000533521 TOMM40LQ969M1 308 aa17.81■□□□□ 0.44
BEST1-207ENST00000533521 SLC25A33Q9BSK2 321 aa17.81■□□□□ 0.44
BEST1-207ENST00000533521 CST11Q9H112 138 aa17.81■□□□□ 0.44
BEST1-207ENST00000533521 FBXO24O75426 580 aa17.8■□□□□ 0.44
BEST1-207ENST00000533521 VDAC2P45880 294 aaPredicted RBP17.8■□□□□ 0.44
BEST1-207ENST00000533521 HABP2Q14520 560 aaPredicted RBP17.8■□□□□ 0.44
BEST1-207ENST00000533521 RAB12Q6IQ22 244 aa17.8■□□□□ 0.44
BEST1-207ENST00000533521 TMEM104Q8NE00 496 aa17.8■□□□□ 0.44
BEST1-207ENST00000533521 NEK7Q8TDX7 302 aa17.8■□□□□ 0.44
BEST1-207ENST00000533521 ARL11Q969Q4 196 aa17.8■□□□□ 0.44
BEST1-207ENST00000533521 A0A1W2PPI3 338 aa17.79■□□□□ 0.44
BEST1-207ENST00000533521 AIPO00170 330 aa17.79■□□□□ 0.44
BEST1-207ENST00000533521 UCHL1P09936 223 aa17.79■□□□□ 0.44
BEST1-207ENST00000533521 PSMA1P25786 263 aaKnown RBP17.79■□□□□ 0.44
BEST1-207ENST00000533521 LOXL3P58215 753 aa17.79■□□□□ 0.44
BEST1-207ENST00000533521 ZNF816Q0VGE8 651 aaPredicted RBP17.79■□□□□ 0.44
BEST1-207ENST00000533521 MED22Q15528 200 aa17.79■□□□□ 0.44
BEST1-207ENST00000533521 C6orf183Q5T699 404 aa17.79■□□□□ 0.44
BEST1-207ENST00000533521 STEAP3Q658P3 488 aa17.79■□□□□ 0.44
BEST1-207ENST00000533521 GLT8D1Q68CQ7 371 aa17.79■□□□□ 0.44
BEST1-207ENST00000533521 LRRTM1Q86UE6 522 aa17.79■□□□□ 0.44
BEST1-207ENST00000533521 NDUFA11Q86Y39 141 aa17.79■□□□□ 0.44
BEST1-207ENST00000533521 SELENOIQ9C0D9 397 aa17.79■□□□□ 0.44
BEST1-207ENST00000533521 GFOD1Q9NXC2 390 aa17.79■□□□□ 0.44
BEST1-207ENST00000533521 PEX16Q9Y5Y5 336 aa17.79■□□□□ 0.44
BEST1-207ENST00000533521 RGS10O43665 173 aa17.78■□□□□ 0.44
BEST1-207ENST00000533521 PEX14O75381 377 aa17.78■□□□□ 0.44
BEST1-207ENST00000533521 CRTAPO75718 401 aaPredicted RBP17.78■□□□□ 0.44
BEST1-207ENST00000533521 OPN1MWP04001 364 aa17.78■□□□□ 0.44
BEST1-207ENST00000533521 OPN1MW2P0DN77 364 aa17.78■□□□□ 0.44
BEST1-207ENST00000533521 OPN1MW3P0DN78 364 aa17.78■□□□□ 0.44
BEST1-207ENST00000533521 SRMP19623 302 aa17.78■□□□□ 0.44
BEST1-207ENST00000533521 CRHBPP24387 322 aa17.78■□□□□ 0.44
BEST1-207ENST00000533521 Q6ZS46 218 aa17.78■□□□□ 0.44
BEST1-207ENST00000533521 PRSS48Q7RTY5 328 aa17.78■□□□□ 0.44
BEST1-207ENST00000533521 OR10X1Q8NGY0 326 aa17.78■□□□□ 0.44
BEST1-207ENST00000533521 UFD1Q92890 307 aa17.78■□□□□ 0.44
BEST1-207ENST00000533521 MBNL3Q9NUK0 354 aaKnown RBP17.78■□□□□ 0.44
BEST1-207ENST00000533521 ETAA1Q9NY74 926 aa17.78■□□□□ 0.44
BEST1-207ENST00000533521 TRAV39A0A0B4J263 110 aa17.77■□□□□ 0.44
BEST1-207ENST00000533521 SPINT2O43291 252 aa17.77■□□□□ 0.44
BEST1-207ENST00000533521 WIPF1O43516 503 aa17.77■□□□□ 0.44
BEST1-207ENST00000533521 PDCD6O75340 191 aa17.77■□□□□ 0.44
BEST1-207ENST00000533521 AMY1AP04745 511 aa17.77■□□□□ 0.44
BEST1-207ENST00000533521 AMY2AP04746 511 aa17.77■□□□□ 0.44
BEST1-207ENST00000533521 CD24P25063 80 aa17.77■□□□□ 0.44
BEST1-207ENST00000533521 RANBP1P43487 201 aa17.77■□□□□ 0.44
BEST1-207ENST00000533521 EBI3Q14213 229 aa17.77■□□□□ 0.44
BEST1-207ENST00000533521 HSD17B12Q53GQ0 312 aa17.77■□□□□ 0.44
BEST1-207ENST00000533521 ARSJQ5FYB0 599 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms