RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 MGMTP16455 207 aa24.28■■□□□ 1.48
SSSCA1-207ENST00000533115 HSPA13P48723 471 aa24.28■■□□□ 1.48
SSSCA1-207ENST00000533115 BLCAPP62952 87 aa24.28■■□□□ 1.48
SSSCA1-207ENST00000533115 CCDC144NLQ6NUI1 221 aa24.28■■□□□ 1.48
SSSCA1-207ENST00000533115 C16orf82Q7Z2V1 217 aa24.28■■□□□ 1.48
SSSCA1-207ENST00000533115 TMEM104Q8NE00 496 aa24.28■■□□□ 1.48
SSSCA1-207ENST00000533115 UFD1Q92890 307 aa24.28■■□□□ 1.48
SSSCA1-207ENST00000533115 FAM90A10PA6NDY2 464 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 FAM90A18PA6NE21 464 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 FAM90A16PA6NEW6 464 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 FAM90A20PA6NIJ5 464 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 FAM90A7PA6NKC0 464 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 FAM90A12PA8MX19 464 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 FAM90A5PA8MXJ8 464 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 FAM90A23PA8MXZ1 464 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 MCRIP1C9JLW8 97 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 MT-ND4P03905 459 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 FAM90A15PP0C7V4 464 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 FAM90A13PP0C7W8 464 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 FAM90A14PP0C7W9 464 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 FAM90A24PP0C7X0 464 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 MNDAP41218 407 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 C2orf68Q2NKX9 166 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 CEACAM19Q7Z692 300 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 LRRTM1Q86UE6 522 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 CCDC107Q8WV48 283 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 CFHR4Q92496 578 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 PHYHIPQ92561 330 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 GHRLQ9UBU3 117 aa24.27■■□□□ 1.48
SSSCA1-207ENST00000533115 AIPO00170 330 aa24.26■■□□□ 1.47
SSSCA1-207ENST00000533115 SC5DO75845 299 aa24.26■■□□□ 1.47
SSSCA1-207ENST00000533115 CRHBPP24387 322 aa24.26■■□□□ 1.47
SSSCA1-207ENST00000533115 RBM48Q5RL73 367 aaKnown RBP24.26■■□□□ 1.47
SSSCA1-207ENST00000533115 LIPKQ5VXJ0 399 aa24.26■■□□□ 1.47
SSSCA1-207ENST00000533115 RAB12Q6IQ22 244 aa24.26■■□□□ 1.47
SSSCA1-207ENST00000533115 ARL11Q969Q4 196 aa24.26■■□□□ 1.47
SSSCA1-207ENST00000533115 RPEQ96AT9 228 aa24.26■■□□□ 1.47
SSSCA1-207ENST00000533115 Q96M66 194 aa24.26■■□□□ 1.47
SSSCA1-207ENST00000533115 LIN7BQ9HAP6 207 aa24.26■■□□□ 1.47
SSSCA1-207ENST00000533115 TET2Q6N021 2002 aaPredicted RBP24.26■■□□□ 1.47
SSSCA1-207ENST00000533115 C15orf65H3BRN8 121 aa24.25■■□□□ 1.47
SSSCA1-207ENST00000533115 TSPAN15O95858 294 aa24.25■■□□□ 1.47
SSSCA1-207ENST00000533115 GNG10P50151 68 aa24.25■■□□□ 1.47
SSSCA1-207ENST00000533115 HSD17B12Q53GQ0 312 aa24.25■■□□□ 1.47
SSSCA1-207ENST00000533115 GLT8D1Q68CQ7 371 aa24.25■■□□□ 1.47
SSSCA1-207ENST00000533115 Q6ZS46 218 aa24.25■■□□□ 1.47
SSSCA1-207ENST00000533115 C11orf44Q8N8P7 122 aa24.25■■□□□ 1.47
SSSCA1-207ENST00000533115 TOMM40LQ969M1 308 aa24.25■■□□□ 1.47
SSSCA1-207ENST00000533115 AKR1E2Q96JD6 320 aa24.25■■□□□ 1.47
SSSCA1-207ENST00000533115 CCDC90BQ9GZT6 254 aa24.25■■□□□ 1.47
SSSCA1-207ENST00000533115 ETAA1Q9NY74 926 aa24.25■■□□□ 1.47
SSSCA1-207ENST00000533115 PEX16Q9Y5Y5 336 aa24.25■■□□□ 1.47
SSSCA1-207ENST00000533115 ORC5O43913 435 aa24.24■■□□□ 1.47
SSSCA1-207ENST00000533115 HSMCR30P0CW71 290 aa24.24■■□□□ 1.47
SSSCA1-207ENST00000533115 SRMP19623 302 aa24.24■■□□□ 1.47
SSSCA1-207ENST00000533115 TPBGQ13641 420 aa24.24■■□□□ 1.47
SSSCA1-207ENST00000533115 ARSJQ5FYB0 599 aaPredicted RBP24.24■■□□□ 1.47
SSSCA1-207ENST00000533115 PRSS48Q7RTY5 328 aa24.24■■□□□ 1.47
SSSCA1-207ENST00000533115 OR52M1Q8NGK5 317 aa24.24■■□□□ 1.47
SSSCA1-207ENST00000533115 CST11Q9H112 138 aa24.24■■□□□ 1.47
SSSCA1-207ENST00000533115 ISYNA1Q9NPH2 558 aa24.24■■□□□ 1.47
SSSCA1-207ENST00000533115 UCHL1P09936 223 aa24.23■■□□□ 1.47
SSSCA1-207ENST00000533115 UBBP0CG47 229 aa24.23■■□□□ 1.47
SSSCA1-207ENST00000533115 FUT3P21217 361 aa24.23■■□□□ 1.47
SSSCA1-207ENST00000533115 VHLP40337 213 aa24.23■■□□□ 1.47
SSSCA1-207ENST00000533115 MADCAM1Q13477 382 aa24.23■■□□□ 1.47
SSSCA1-207ENST00000533115 FBLN7Q53RD9 439 aa24.23■■□□□ 1.47
SSSCA1-207ENST00000533115 CAPSLQ8WWF8 208 aa24.23■■□□□ 1.47
SSSCA1-207ENST00000533115 TMEM203Q969S6 136 aa24.23■■□□□ 1.47
SSSCA1-207ENST00000533115 FAM46BQ96A09 425 aa24.23■■□□□ 1.47
SSSCA1-207ENST00000533115 RBM14Q96PK6 669 aaKnown RBP24.23■■□□□ 1.47
SSSCA1-207ENST00000533115 SLC25A33Q9BSK2 321 aa24.23■■□□□ 1.47
SSSCA1-207ENST00000533115 OR2F2O95006 317 aa24.22■■□□□ 1.47
SSSCA1-207ENST00000533115 GLAP06280 429 aa24.22■■□□□ 1.47
SSSCA1-207ENST00000533115 CSF1P09603 554 aa24.22■■□□□ 1.47
SSSCA1-207ENST00000533115 C1orf100Q5SVJ3 147 aa24.22■■□□□ 1.47
SSSCA1-207ENST00000533115 SYT6Q5T7P8 510 aaPredicted RBP24.22■■□□□ 1.47
SSSCA1-207ENST00000533115 HIST2H2BDQ6DRA6 164 aa24.22■■□□□ 1.47
SSSCA1-207ENST00000533115 GAPTQ8N292 157 aa24.22■■□□□ 1.47
SSSCA1-207ENST00000533115 OR10X1Q8NGY0 326 aa24.22■■□□□ 1.47
SSSCA1-207ENST00000533115 UBALD1Q8TB05 177 aa24.22■■□□□ 1.47
SSSCA1-207ENST00000533115 CNBD2Q96M20 576 aa24.22■■□□□ 1.47
SSSCA1-207ENST00000533115 TRAPPC2LQ9UL33 140 aa24.22■■□□□ 1.47
SSSCA1-207ENST00000533115 A0A1W2PPE3 182 aa24.21■■□□□ 1.47
SSSCA1-207ENST00000533115 SDCBPO00560 298 aaPredicted RBP24.21■■□□□ 1.47
SSSCA1-207ENST00000533115 PEX14O75381 377 aa24.21■■□□□ 1.47
SSSCA1-207ENST00000533115 CA11O75493 328 aa24.21■■□□□ 1.47
SSSCA1-207ENST00000533115 VDAC2P45880 294 aaPredicted RBP24.21■■□□□ 1.47
SSSCA1-207ENST00000533115 SIGIRRQ6IA17 410 aa24.21■■□□□ 1.47
SSSCA1-207ENST00000533115 OR4K15Q8NH41 348 aa24.21■■□□□ 1.47
SSSCA1-207ENST00000533115 WNT10AQ9GZT5 417 aa24.21■■□□□ 1.47
SSSCA1-207ENST00000533115 FAM90A9PA6NNJ1 464 aa24.2■■□□□ 1.46
SSSCA1-207ENST00000533115 MPIG6BO95866 241 aa24.2■■□□□ 1.46
SSSCA1-207ENST00000533115 FAM106CPP0CH98 169 aa24.2■■□□□ 1.46
SSSCA1-207ENST00000533115 RAB7AP51149 207 aa24.2■■□□□ 1.46
SSSCA1-207ENST00000533115 LOXL3P58215 753 aa24.2■■□□□ 1.46
SSSCA1-207ENST00000533115 MLLT11Q13015 90 aaPredicted RBP24.2■■□□□ 1.46
SSSCA1-207ENST00000533115 DIAPH2-AS1Q14236 149 aa24.2■■□□□ 1.46
SSSCA1-207ENST00000533115 TRAM1Q15629 374 aa24.2■■□□□ 1.46
SSSCA1-207ENST00000533115 THNSL2Q86YJ6 484 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms