RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 A6NJ64 397 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 ZNF729A6NN14 1252 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 CRLF1O75462 422 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 RBP4P02753 201 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 HIST1H1DP16402 221 aaKnown RBP9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 TALDO1P37837 337 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 GLP1RP43220 463 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 DLX6P56179 175 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 BPIFB3P59826 476 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 ERVFRD-1P60508 538 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 CDNFQ49AH0 187 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 UBE2NLQ5JXB2 153 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 C6orf183Q5T699 404 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 GPR157Q5UAW9 335 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 NCR3LG1Q68D85 454 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 IL17RELQ6ZVW7 336 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 TCF23Q7RTU1 214 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 LURAP1LQ8IV03 231 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 GAPTQ8N292 157 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 C11orf42Q8N5U0 333 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 SAMD12Q8N8I0 201 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 OR13A1Q8NGR1 328 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 OR4K15Q8NH41 348 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 MRGPRDQ8TDS7 321 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 DYRK2Q92630 601 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 LHX4Q969G2 390 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 CMTM3Q96MX0 182 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 ABCG5Q9H222 651 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 UNKLQ9H9P5 680 aaKnown RBP9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 CHMP1AQ9HD42 196 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 RAB9BQ9NP90 201 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 SIRT7Q9NRC8 400 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 NUP50Q9UKX7 468 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 ABCA1O95477 2261 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 YLPM1P49750 1951 aaKnown RBP9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 F8P00451 2351 aa9.22□□□□□ -0.93
TRAPPC4-211ENST00000533012 CSPG4Q6UVK1 2322 aa9.21□□□□□ -0.93
TRAPPC4-211ENST00000533012 TRAV39A0A0B4J263 110 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 CENPVL3A0A0U1RRI6 287 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 POM121CA8CG34 1229 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 SERPINE3A8MV23 424 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 ORC5O43913 435 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 CD3GP09693 182 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 CGB3P0DN86 165 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 CGB7P0DN87 165 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 IGHV1-8P0DP01 117 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 GNB3P16520 340 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 SRD5A1P18405 259 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 CDK2P24941 298 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 TNFSF8P32971 234 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 GUCA2AQ02747 115 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 SCGB2A2Q13296 93 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 ARFRP1Q13795 201 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 OXA1LQ15070 435 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 C17orf58Q2M2W7 97 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 OR52W1Q6IF63 320 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 TRAT1Q6PIZ9 186 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 HEPN1Q6WQI6 88 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 MRPL30Q8TCC3 161 aaKnown RBP9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 SLC25A38Q96DW6 304 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 CMSS1Q9BQ75 279 aaKnown RBP9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 ZMAT3Q9HA38 289 aaKnown RBP9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 ABCB10Q9NRK6 738 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 CALYQ9NYX4 217 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 KCNIP1Q9NZI2 227 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 AK3Q9UIJ7 227 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 KCNK7Q9Y2U2 307 aa9.21□□□□□ -0.94
TRAPPC4-211ENST00000533012 TRAV18A0A075B6X5 111 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 IGHV3OR16-10A0A075B7F0 116 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 TRAV40A0A0B4J280 105 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 FABP12A6NFH5 140 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 NPIPB11E5RHQ5 1161 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 MFNGO00587 321 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 SPINT2O43291 252 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 NAPSAO96009 420 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 GSTP1P09211 210 aaKnown RBP9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 IGHV4-38-2P0DP08 117 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 RCC1P18754 421 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 OMGP23515 440 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 FPR2P25090 351 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 KLF17Q5JT82 389 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 FAM131AQ6UXB0 335 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 BAIAP2L2Q6UXY1 529 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 ZNF782Q6ZMW2 699 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 ZNF554Q86TJ5 538 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 RTN4RL2Q86UN3 420 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 LYSMD2Q8IV50 215 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 PDZD9Q8IXQ8 264 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 POC5Q8NA72 575 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 OR10A7Q8NGE5 316 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 OR13D1Q8NGV5 346 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 RFESDQ8TAC1 157 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 TNFRSF14Q92956 283 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 ARL11Q969Q4 196 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 DIRAS2Q96HU8 199 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 CYYR1Q96J86 154 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 MS4A7Q9GZW8 240 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 LINC00574Q9H8X3 128 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 C12orf4Q9NQ89 552 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms