RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 A0A0U1RQK1 487 aa20.22■□□□□ 0.83
USP48-214ENST00000532737 CA11O75493 328 aa20.22■□□□□ 0.83
USP48-214ENST00000532737 SERPINB10P48595 397 aa20.22■□□□□ 0.83
USP48-214ENST00000532737 MOGAT2Q3SYC2 334 aa20.22■□□□□ 0.83
USP48-214ENST00000532737 PLAC9Q5JTB6 97 aa20.22■□□□□ 0.83
USP48-214ENST00000532737 RFESDQ8TAC1 157 aa20.22■□□□□ 0.83
USP48-214ENST00000532737 LGALS14Q8TCE9 139 aa20.22■□□□□ 0.83
USP48-214ENST00000532737 ZNF418Q8TF45 676 aaPredicted RBP20.22■□□□□ 0.83
USP48-214ENST00000532737 ARHGAP5-AS1Q96IT6 56 aa20.22■□□□□ 0.83
USP48-214ENST00000532737 LINC00574Q9H8X3 128 aa20.22■□□□□ 0.83
USP48-214ENST00000532737 NPIPB11E5RHQ5 1161 aa20.21■□□□□ 0.83
USP48-214ENST00000532737 GZMHP20718 246 aa20.21■□□□□ 0.83
USP48-214ENST00000532737 SSTR5P35346 364 aa20.21■□□□□ 0.83
USP48-214ENST00000532737 SAA4P35542 130 aa20.21■□□□□ 0.83
USP48-214ENST00000532737 RPL5P46777 297 aaKnown RBP20.21■□□□□ 0.83
USP48-214ENST00000532737 SRSF2Q01130 221 aaKnown RBP20.21■□□□□ 0.83
USP48-214ENST00000532737 OR13D1Q8NGV5 346 aa20.21■□□□□ 0.83
USP48-214ENST00000532737 OR5H6Q8NGV6 325 aa20.21■□□□□ 0.83
USP48-214ENST00000532737 TMEM133Q9H2Q1 129 aa20.21■□□□□ 0.83
USP48-214ENST00000532737 TRAPPC2LQ9UL33 140 aa20.21■□□□□ 0.83
USP48-214ENST00000532737 HSF4Q9ULV5 492 aa20.21■□□□□ 0.83
USP48-214ENST00000532737 RAB27BO00194 218 aa20.2■□□□□ 0.82
USP48-214ENST00000532737 TCF21O43680 179 aa20.2■□□□□ 0.82
USP48-214ENST00000532737 VENTXO95231 258 aa20.2■□□□□ 0.82
USP48-214ENST00000532737 UTF1Q5T230 341 aa20.2■□□□□ 0.82
USP48-214ENST00000532737 Q6ZTK2 550 aa20.2■□□□□ 0.82
USP48-214ENST00000532737 USP43Q70EL4 1123 aa20.2■□□□□ 0.82
USP48-214ENST00000532737 OR11H6Q8NGC7 330 aa20.2■□□□□ 0.82
USP48-214ENST00000532737 MRPL30Q8TCC3 161 aaKnown RBP20.2■□□□□ 0.82
USP48-214ENST00000532737 KIRREL1Q96J84 757 aa20.2■□□□□ 0.82
USP48-214ENST00000532737 PECRQ9BY49 303 aa20.2■□□□□ 0.82
USP48-214ENST00000532737 MEIOCA2RUB1 952 aa20.19■□□□□ 0.82
USP48-214ENST00000532737 C15orf65H3BRN8 121 aa20.19■□□□□ 0.82
USP48-214ENST00000532737 RCC1P18754 421 aaPredicted RBP20.19■□□□□ 0.82
USP48-214ENST00000532737 MIDNQ504T8 468 aa20.19■□□□□ 0.82
USP48-214ENST00000532737 OR52W1Q6IF63 320 aa20.19■□□□□ 0.82
USP48-214ENST00000532737 OR10R2Q8NGX6 335 aa20.19■□□□□ 0.82
USP48-214ENST00000532737 UBALD1Q8TB05 177 aa20.19■□□□□ 0.82
USP48-214ENST00000532737 AJUBAQ96IF1 538 aa20.19■□□□□ 0.82
USP48-214ENST00000532737 ATG5Q9H1Y0 275 aa20.19■□□□□ 0.82
USP48-214ENST00000532737 PRDM13Q9H4Q3 707 aa20.19■□□□□ 0.82
USP48-214ENST00000532737 IDI2-AS1Q9NZ38 188 aa20.19■□□□□ 0.82
USP48-214ENST00000532737 AK3Q9UIJ7 227 aa20.19■□□□□ 0.82
USP48-214ENST00000532737 SCOCQ9UIL1 159 aa20.19■□□□□ 0.82
USP48-214ENST00000532737 A0A0A6YYJ9 748 aa20.18■□□□□ 0.82
USP48-214ENST00000532737 IGHV2-26A0A0B4J1V2 119 aa20.18■□□□□ 0.82
USP48-214ENST00000532737 METTL21EPA6NDL7 271 aa20.18■□□□□ 0.82
USP48-214ENST00000532737 ODF3BA8MYP8 253 aa20.18■□□□□ 0.82
USP48-214ENST00000532737 HILS1P60008 231 aa20.18■□□□□ 0.82
USP48-214ENST00000532737 FAM189A2Q15884 450 aa20.18■□□□□ 0.82
USP48-214ENST00000532737 LTC4SQ16873 150 aa20.18■□□□□ 0.82
USP48-214ENST00000532737 OLFML2AQ68BL7 652 aa20.18■□□□□ 0.82
USP48-214ENST00000532737 RBMS3Q6XE24 437 aaKnown RBP20.18■□□□□ 0.82
USP48-214ENST00000532737 CROCCP3Q8IVE0 287 aa20.18■□□□□ 0.82
USP48-214ENST00000532737 C17orf50Q8WW18 174 aa20.18■□□□□ 0.82
USP48-214ENST00000532737 ARL11Q969Q4 196 aa20.18■□□□□ 0.82
USP48-214ENST00000532737 SLC25A46Q96AG3 418 aa20.18■□□□□ 0.82
USP48-214ENST00000532737 RAB3CQ96E17 227 aa20.18■□□□□ 0.82
USP48-214ENST00000532737 ESM1Q9NQ30 184 aa20.18■□□□□ 0.82
USP48-214ENST00000532737 KCNK7Q9Y2U2 307 aa20.18■□□□□ 0.82
USP48-214ENST00000532737 FAM172BPA6NC97 362 aa20.17■□□□□ 0.82
USP48-214ENST00000532737 C12orf77C9JDV5 145 aa20.17■□□□□ 0.82
USP48-214ENST00000532737 ORC5O43913 435 aa20.17■□□□□ 0.82
USP48-214ENST00000532737 NAPSAO96009 420 aa20.17■□□□□ 0.82
USP48-214ENST00000532737 NFYBP25208 207 aa20.17■□□□□ 0.82
USP48-214ENST00000532737 SCAND1P57086 179 aa20.17■□□□□ 0.82
USP48-214ENST00000532737 ZNF626Q68DY1 528 aa20.17■□□□□ 0.82
USP48-214ENST00000532737 Q6ZPA2 131 aa20.17■□□□□ 0.82
USP48-214ENST00000532737 CLVS1Q8IUQ0 354 aaPredicted RBP20.17■□□□□ 0.82
USP48-214ENST00000532737 ABHD12Q8N2K0 398 aa20.17■□□□□ 0.82
USP48-214ENST00000532737 TMEM158Q8WZ71 300 aa20.17■□□□□ 0.82
USP48-214ENST00000532737 ZDHHC16Q969W1 377 aa20.17■□□□□ 0.82
USP48-214ENST00000532737 HDHD3Q9BSH5 251 aaPredicted RBP20.17■□□□□ 0.82
USP48-214ENST00000532737 ZNF286AQ9HBT8 521 aa20.17■□□□□ 0.82
USP48-214ENST00000532737 MBNL3Q9NUK0 354 aaKnown RBP20.17■□□□□ 0.82
USP48-214ENST00000532737 ETV7Q9Y603 341 aa20.17■□□□□ 0.82
USP48-214ENST00000532737 A0A087X0M5 115 aa20.16■□□□□ 0.82
USP48-214ENST00000532737 A0A1B0GX30 115 aa20.16■□□□□ 0.82
USP48-214ENST00000532737 TMEM127O75204 238 aa20.16■□□□□ 0.82
USP48-214ENST00000532737 ARG1P05089 322 aa20.16■□□□□ 0.82
USP48-214ENST00000532737 CD34P28906 385 aa20.16■□□□□ 0.82
USP48-214ENST00000532737 DYNC1I2Q13409 638 aaKnown RBP20.16■□□□□ 0.82
USP48-214ENST00000532737 C6orf183Q5T699 404 aa20.16■□□□□ 0.82
USP48-214ENST00000532737 C5orf24Q7Z6I8 188 aa20.16■□□□□ 0.82
USP48-214ENST00000532737 LHFPL4Q7Z7J7 247 aa20.16■□□□□ 0.82
USP48-214ENST00000532737 ZDHHC22Q8N966 263 aa20.16■□□□□ 0.82
USP48-214ENST00000532737 OR10A7Q8NGE5 316 aa20.16■□□□□ 0.82
USP48-214ENST00000532737 CLEC7AQ9BXN2 247 aa20.16■□□□□ 0.82
USP48-214ENST00000532737 RHBDL2Q9NX52 303 aa20.16■□□□□ 0.82
USP48-214ENST00000532737 ABRACLQ9P1F3 81 aa20.16■□□□□ 0.82
USP48-214ENST00000532737 FAM96BQ9Y3D0 163 aa20.16■□□□□ 0.82
USP48-214ENST00000532737 BAMBIQ13145 260 aa20.15■□□□□ 0.82
USP48-214ENST00000532737 LDLRAD2Q5SZI1 272 aa20.15■□□□□ 0.82
USP48-214ENST00000532737 Q6YL49 198 aa20.15■□□□□ 0.82
USP48-214ENST00000532737 NDNFQ8TB73 568 aa20.15■□□□□ 0.82
USP48-214ENST00000532737 SLC25A38Q96DW6 304 aa20.15■□□□□ 0.82
USP48-214ENST00000532737 DCSTAMPQ9H295 470 aa20.15■□□□□ 0.82
USP48-214ENST00000532737 ZMAT3Q9HA38 289 aaKnown RBP20.15■□□□□ 0.82
USP48-214ENST00000532737 TAF9BQ9HBM6 251 aa20.15■□□□□ 0.82
USP48-214ENST00000532737 CHMP1AQ9HD42 196 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms