RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 MAGEB3O15480 346 aa14.45□□□□□ -0.1
SSSCA1-206ENST00000531405 IGHV3-43DP0DP04 118 aa14.45□□□□□ -0.1
SSSCA1-206ENST00000531405 KCNJ3P48549 501 aa14.45□□□□□ -0.1
SSSCA1-206ENST00000531405 PNLIPRP3Q17RR3 467 aa14.45□□□□□ -0.1
SSSCA1-206ENST00000531405 NKAPLQ5M9Q1 402 aa14.45□□□□□ -0.1
SSSCA1-206ENST00000531405 IZUMO1Q8IYV9 350 aa14.45□□□□□ -0.1
SSSCA1-206ENST00000531405 Q8N9W7 124 aa14.45□□□□□ -0.1
SSSCA1-206ENST00000531405 Q8NFD4 153 aa14.45□□□□□ -0.1
SSSCA1-206ENST00000531405 LIN7CQ9NUP9 197 aaKnown RBP14.45□□□□□ -0.1
SSSCA1-206ENST00000531405 ERVK13-1Q9NX77 482 aa14.45□□□□□ -0.1
SSSCA1-206ENST00000531405 ZMAT5Q9UDW3 170 aaKnown RBP14.45□□□□□ -0.1
SSSCA1-206ENST00000531405 ST3GAL6Q9Y274 331 aa14.45□□□□□ -0.1
SSSCA1-206ENST00000531405 LSM4Q9Y4Z0 139 aaKnown RBP14.45□□□□□ -0.1
SSSCA1-206ENST00000531405 SNTNA6NMZ2 147 aa14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 C15orf65H3BRN8 121 aa14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 SDCBPO00560 298 aaPredicted RBP14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 RAMP3O60896 148 aa14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 OR7C1O76099 320 aaPredicted RBP14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 GABRB1P18505 474 aa14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 GTF2A1P52655 376 aaPredicted RBP14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 GPR50Q13585 617 aa14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 CXorf66Q5JRM2 361 aaPredicted RBP14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 OR2T10Q8NGZ9 312 aa14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 OR8U1Q8NH10 309 aa14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 CCDC107Q8WV48 283 aa14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 ARL11Q969Q4 196 aa14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 CPNE2Q96FN4 548 aaPredicted RBP14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 HSPB9Q9BQS6 159 aa14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 JAM3Q9BX67 310 aa14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 PLSCR3Q9NRY6 295 aa14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 ING4Q9UNL4 249 aa14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 DYNC2H1Q8NCM8 4307 aaKnown RBP14.44□□□□□ -0.1
SSSCA1-206ENST00000531405 TMEM30CPA0ZSE6 113 aa14.43□□□□□ -0.1
SSSCA1-206ENST00000531405 ZNF736B4DX44 427 aaPredicted RBP14.43□□□□□ -0.1
SSSCA1-206ENST00000531405 GEMIN2O14893 280 aaKnown RBP14.43□□□□□ -0.1
SSSCA1-206ENST00000531405 RPSAP08865 295 aaKnown RBP14.43□□□□□ -0.1
SSSCA1-206ENST00000531405 NHLRC4P0CG21 123 aaPredicted RBP14.43□□□□□ -0.1
SSSCA1-206ENST00000531405 RASSF2P50749 326 aa14.43□□□□□ -0.1
SSSCA1-206ENST00000531405 RBM11P57052 281 aaKnown RBP14.43□□□□□ -0.1
SSSCA1-206ENST00000531405 ASCL4Q6XD76 172 aa14.43□□□□□ -0.1
SSSCA1-206ENST00000531405 TMEM104Q8NE00 496 aa14.43□□□□□ -0.1
SSSCA1-206ENST00000531405 OR5M8Q8NGP6 311 aa14.43□□□□□ -0.1
SSSCA1-206ENST00000531405 RTN4IP1Q8WWV3 396 aaPredicted RBP14.43□□□□□ -0.1
SSSCA1-206ENST00000531405 ASCL2Q99929 193 aa14.43□□□□□ -0.1
SSSCA1-206ENST00000531405 GMPPBQ9Y5P6 360 aa14.43□□□□□ -0.1
SSSCA1-206ENST00000531405 SLC31A2O15432 143 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 MPZL2O60487 215 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 CIB2O75838 187 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 FADS2O95864 444 aaKnown RBP14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 GZMHP20718 246 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 SERPINA2P20848 420 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 ECI1P42126 302 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 CDX1P47902 265 aaPredicted RBP14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 ALDH3A2P51648 485 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 GBX2P52951 348 aaPredicted RBP14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 GP2P55259 537 aaKnown RBP14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 FOXE3Q13461 319 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 KIR2DS1Q14954 304 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 C9orf66Q5T8R8 295 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 LINC00311Q8N616 119 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 OR52I1Q8NGK6 324 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 OR52N1Q8NH53 320 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 ST6GALNAC6Q969X2 333 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 MYCBPQ99417 103 aaPredicted RBP14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 S1PR3Q99500 378 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 IFT22Q9H7X7 185 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 GFOD1Q9NXC2 390 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 SCOCQ9UIL1 159 aa14.42□□□□□ -0.1
SSSCA1-206ENST00000531405 A0A1W2PP11 408 aa14.41□□□□□ -0.1
SSSCA1-206ENST00000531405 SEC14L6B5MCN3 397 aa14.41□□□□□ -0.1
SSSCA1-206ENST00000531405 MOSP00540 346 aa14.41□□□□□ -0.1
SSSCA1-206ENST00000531405 CFHR3Q02985 330 aa14.41□□□□□ -0.1
SSSCA1-206ENST00000531405 MRPL28Q13084 256 aaKnown RBP14.41□□□□□ -0.1
SSSCA1-206ENST00000531405 NHLRC3Q5JS37 347 aa14.41□□□□□ -0.1
SSSCA1-206ENST00000531405 ATAD3CQ5T2N8 411 aa14.41□□□□□ -0.1
SSSCA1-206ENST00000531405 XAF1Q6GPH4 301 aa14.41□□□□□ -0.1
SSSCA1-206ENST00000531405 CBR4Q8N4T8 237 aa14.41□□□□□ -0.1
SSSCA1-206ENST00000531405 RNF152Q8N8N0 203 aa14.41□□□□□ -0.1
SSSCA1-206ENST00000531405 OR52M1Q8NGK5 317 aa14.41□□□□□ -0.1
SSSCA1-206ENST00000531405 ORAI1Q96D31 301 aa14.41□□□□□ -0.1
SSSCA1-206ENST00000531405 RASL11BQ9BPW5 248 aa14.41□□□□□ -0.1
SSSCA1-206ENST00000531405 GON7Q9BXV9 100 aa14.41□□□□□ -0.1
SSSCA1-206ENST00000531405 METTL9Q9H1A3 318 aa14.41□□□□□ -0.1
SSSCA1-206ENST00000531405 H3BNX3 289 aa14.4□□□□□ -0.1
SSSCA1-206ENST00000531405 CSTBP04080 98 aaKnown RBP14.4□□□□□ -0.1
SSSCA1-206ENST00000531405 ELANEP08246 267 aa14.4□□□□□ -0.1
SSSCA1-206ENST00000531405 CD1BP29016 333 aa14.4□□□□□ -0.1
SSSCA1-206ENST00000531405 F2RL1P55085 397 aa14.4□□□□□ -0.1
SSSCA1-206ENST00000531405 RAB40BQ12829 278 aa14.4□□□□□ -0.1
SSSCA1-206ENST00000531405 DDI2Q5TDH0 399 aa14.4□□□□□ -0.1
SSSCA1-206ENST00000531405 NEK7Q8TDX7 302 aa14.4□□□□□ -0.1
SSSCA1-206ENST00000531405 TMEM106AQ96A25 262 aa14.4□□□□□ -0.1
SSSCA1-206ENST00000531405 IL36GQ9NZH8 169 aa14.4□□□□□ -0.1
SSSCA1-206ENST00000531405 RRP9O43818 475 aaKnown RBP14.39□□□□□ -0.11
SSSCA1-206ENST00000531405 CD2P06729 351 aa14.39□□□□□ -0.11
SSSCA1-206ENST00000531405 LIMS3P0CW19 117 aa14.39□□□□□ -0.11
SSSCA1-206ENST00000531405 LIMS4P0CW20 117 aa14.39□□□□□ -0.11
SSSCA1-206ENST00000531405 VDAC1P21796 283 aa14.39□□□□□ -0.11
SSSCA1-206ENST00000531405 IL3RAP26951 378 aa14.39□□□□□ -0.11
SSSCA1-206ENST00000531405 ZNF93P35789 620 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms