RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 TMEM50AO95807 157 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 HLA-HP01893 362 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 C3orf79P0CE67 100 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 CCR2P41597 374 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 ZNF83P51522 516 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 ZNF133P52736 654 aaPredicted RBP6.71□□□□□ -1.34
PTPRK-219ENST00000531050 SEC13P55735 322 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 MEF2BQ02080 365 aaPredicted RBP6.71□□□□□ -1.34
PTPRK-219ENST00000531050 Q0VG73 95 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 ZIC1Q15915 447 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 C5orf64Q2M2E5 130 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 SPIN3Q5JUX0 258 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 ABHD17CQ6PCB6 329 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 SHISA2Q6UWI4 295 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 RNF44Q7L0R7 432 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 OR2Y1Q8NGV0 311 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 MSI2Q96DH6 328 aaKnown RBP6.71□□□□□ -1.34
PTPRK-219ENST00000531050 SFRP2Q96HF1 295 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 LRFN3Q9BTN0 628 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 LIME1Q9H400 295 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 BANF2Q9H503 90 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 FANCMQ8IYD8 2048 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 KIAA2026Q5HYC2 2103 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 IGKV1D-42A0A075B6H8 117 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 LINC01553A4QN01 128 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 HIDE1A8MVS5 230 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 TMEM250H0YL14 139 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 J3QR06 171 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 SLC25A17O43808 307 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 ZNF737O75373 536 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 ADH1BP00325 375 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 IFNA1P01562 189 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 ISG15P05161 165 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 GLI4P10075 376 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 ECI1P42126 302 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 FOXL2P58012 376 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 ZP4Q12836 540 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 FOXL1Q12952 345 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 ZNF154Q13106 437 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 BVES-AS1Q5T3Y7 98 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 LHX8Q68G74 356 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 SLC18B1Q6NT16 456 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 UFSP1Q6NVU6 142 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 TSPAN32Q96QS1 320 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 UBE2ZQ9H832 354 aaPredicted RBP6.71□□□□□ -1.34
PTPRK-219ENST00000531050 GPR27Q9NS67 375 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 TP73-AS1Q9UF72 201 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 EMC9Q9Y3B6 208 aa6.71□□□□□ -1.34
PTPRK-219ENST00000531050 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 IGKV1-8A0A0C4DH67 115 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 A0A1W2PPV9 198 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 MLNRO43193 412 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 TNFSF12O43508 249 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 SSSCA1O60232 199 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 MT-CO2P00403 227 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 ERGP11308 486 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 CEBPBP17676 345 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 CBLN1P23435 193 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 SMAGPQ0VAQ4 97 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 ALG10Q5BKT4 473 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 GLIPR1L1Q6UWM5 242 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 WDR82Q6UXN9 313 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 ZNF765Q7L2R6 523 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 NEGR1Q7Z3B1 354 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 HAPLN4Q86UW8 402 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 DAZLQ92904 295 aaKnown RBP6.7□□□□□ -1.34
PTPRK-219ENST00000531050 GUCD1Q96NT3 240 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 PECRQ9BY49 303 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 GTSF1LQ9H1H1 148 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 HTTP42858 3142 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 COL4A6Q14031 1691 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 MUC21A0A0G2JKD1 596 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 MUC21A0A140T8X8 626 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 NKX2-6A6NCS4 301 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 SHISA7A6NL88 538 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 SLC33A1O00400 549 aaPredicted RBP6.7□□□□□ -1.34
PTPRK-219ENST00000531050 VENTXO95231 258 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 PSG4Q00888 419 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 KIAA1644Q3SXP7 199 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 ACSF3Q4G176 576 aaPredicted RBP6.7□□□□□ -1.34
PTPRK-219ENST00000531050 MUC21Q5SSG8 566 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 KIAA0895LQ68EN5 471 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 ATG4DQ86TL0 474 aaPredicted RBP6.7□□□□□ -1.34
PTPRK-219ENST00000531050 LRRC25Q8N386 305 aaPredicted RBP6.7□□□□□ -1.34
PTPRK-219ENST00000531050 ARHGEF39Q8N4T4 335 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 SUMF1Q8NBK3 374 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 OR4P4Q8NGL7 312 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 MRPL30Q8TCC3 161 aaKnown RBP6.7□□□□□ -1.34
PTPRK-219ENST00000531050 RTN4IP1Q8WWV3 396 aaPredicted RBP6.7□□□□□ -1.34
PTPRK-219ENST00000531050 ADAT3Q96EY9 351 aaPredicted RBP6.7□□□□□ -1.34
PTPRK-219ENST00000531050 POM121L2Q96KW2 1035 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 SIGLEC12Q96PQ1 595 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 SPACA5Q96QH8 159 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 CCDC3Q9BQI4 270 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 RTN4RQ9BZR6 473 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.7□□□□□ -1.34
PTPRK-219ENST00000531050 OR51B2Q9Y5P1 312 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 R4GMQ9 66 aa6.7□□□□□ -1.34
PTPRK-219ENST00000531050 KIF26BQ2KJY2 2108 aa6.69□□□□□ -1.34
PTPRK-219ENST00000531050 TRAPPC2LH3BP13 241 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms