RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 PRR25Q96S07 402 aa12.46□□□□□ -0.41
CHMP4A-204ENST00000530996 GON7Q9BXV9 100 aa12.46□□□□□ -0.41
CHMP4A-204ENST00000530996 METTL9Q9H1A3 318 aa12.46□□□□□ -0.41
CHMP4A-204ENST00000530996 NCOR1P1Q9H4R4 102 aa12.46□□□□□ -0.41
CHMP4A-204ENST00000530996 ING4Q9UNL4 249 aa12.46□□□□□ -0.41
CHMP4A-204ENST00000530996 ST3GAL6Q9Y274 331 aa12.46□□□□□ -0.41
CHMP4A-204ENST00000530996 IGHV3-43A0A0B4J1X8 118 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 E9PI62 339 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 MPZL2O60487 215 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 IGHV3-43DP0DP04 118 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 SERPINA2P20848 420 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 ALDH3A2P51648 485 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 RBM11P57052 281 aaKnown RBP12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 GPR50Q13585 617 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 PNLIPRP3Q17RR3 467 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 DDI2Q5TDH0 399 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 SLC16A12Q6ZSM3 486 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 TGIF2LXQ8IUE1 241 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 ARL11Q969Q4 196 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 EAF1Q96JC9 268 aaPredicted RBP12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 RASL11BQ9BPW5 248 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 JAM3Q9BX67 310 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 LINC00574Q9H8X3 128 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 AMBNQ9NP70 447 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 LIN7CQ9NUP9 197 aaKnown RBP12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 ERVK13-1Q9NX77 482 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 ZNF581Q9P0T4 197 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 U3KQK5 164 aa12.45□□□□□ -0.42
CHMP4A-204ENST00000530996 LINC01548A6NM66 108 aa12.44□□□□□ -0.42
CHMP4A-204ENST00000530996 AIPO00170 330 aa12.44□□□□□ -0.42
CHMP4A-204ENST00000530996 RAMP3O60896 148 aa12.44□□□□□ -0.42
CHMP4A-204ENST00000530996 ATP5HO75947 161 aa12.44□□□□□ -0.42
CHMP4A-204ENST00000530996 VDAC1P21796 283 aa12.44□□□□□ -0.42
CHMP4A-204ENST00000530996 C9orf66Q5T8R8 295 aa12.44□□□□□ -0.42
CHMP4A-204ENST00000530996 STX19Q8N4C7 294 aa12.44□□□□□ -0.42
CHMP4A-204ENST00000530996 CBR4Q8N4T8 237 aa12.44□□□□□ -0.42
CHMP4A-204ENST00000530996 CCDC107Q8WV48 283 aa12.44□□□□□ -0.42
CHMP4A-204ENST00000530996 Q96MT0 163 aa12.44□□□□□ -0.42
CHMP4A-204ENST00000530996 ABCG5Q9H222 651 aa12.44□□□□□ -0.42
CHMP4A-204ENST00000530996 COL7A1Q02388 2944 aa12.44□□□□□ -0.42
CHMP4A-204ENST00000530996 KIAA2026Q5HYC2 2103 aa12.43□□□□□ -0.42
CHMP4A-204ENST00000530996 SEC14L6B5MCN3 397 aa12.43□□□□□ -0.42
CHMP4A-204ENST00000530996 GEMIN2O14893 280 aaKnown RBP12.43□□□□□ -0.42
CHMP4A-204ENST00000530996 LY86O95711 162 aa12.43□□□□□ -0.42
CHMP4A-204ENST00000530996 MOSP00540 346 aa12.43□□□□□ -0.42
CHMP4A-204ENST00000530996 ECI1P42126 302 aa12.43□□□□□ -0.42
CHMP4A-204ENST00000530996 PAX5Q02548 391 aa12.43□□□□□ -0.42
CHMP4A-204ENST00000530996 RAB40BQ12829 278 aa12.43□□□□□ -0.42
CHMP4A-204ENST00000530996 FOXE3Q13461 319 aa12.43□□□□□ -0.42
CHMP4A-204ENST00000530996 PRR18Q8N4B5 295 aa12.43□□□□□ -0.42
CHMP4A-204ENST00000530996 Q8N9W7 124 aa12.43□□□□□ -0.42
CHMP4A-204ENST00000530996 OR52N1Q8NH53 320 aa12.43□□□□□ -0.42
CHMP4A-204ENST00000530996 GPR148Q8TDV2 347 aa12.43□□□□□ -0.42
CHMP4A-204ENST00000530996 TMEM106AQ96A25 262 aa12.43□□□□□ -0.42
CHMP4A-204ENST00000530996 DCLRE1BQ9H816 532 aa12.43□□□□□ -0.42
CHMP4A-204ENST00000530996 GNG12Q9UBI6 72 aa12.43□□□□□ -0.42
CHMP4A-204ENST00000530996 TENM3Q9P273 2699 aa12.42□□□□□ -0.42
CHMP4A-204ENST00000530996 NHLRC4P0CG21 123 aaPredicted RBP12.42□□□□□ -0.42
CHMP4A-204ENST00000530996 GZMHP20718 246 aa12.42□□□□□ -0.42
CHMP4A-204ENST00000530996 MYF6P23409 242 aa12.42□□□□□ -0.42
CHMP4A-204ENST00000530996 ZNF93P35789 620 aaPredicted RBP12.42□□□□□ -0.42
CHMP4A-204ENST00000530996 GTF2A1P52655 376 aaPredicted RBP12.42□□□□□ -0.42
CHMP4A-204ENST00000530996 LINC00596Q86U02 117 aa12.42□□□□□ -0.42
CHMP4A-204ENST00000530996 OR10V1Q8NGI7 309 aa12.42□□□□□ -0.42
CHMP4A-204ENST00000530996 RTN4IP1Q8WWV3 396 aaPredicted RBP12.42□□□□□ -0.42
CHMP4A-204ENST00000530996 RGP1Q92546 391 aaPredicted RBP12.42□□□□□ -0.42
CHMP4A-204ENST00000530996 PAK1IP1Q9NWT1 392 aaPredicted RBP12.42□□□□□ -0.42
CHMP4A-204ENST00000530996 GFOD1Q9NXC2 390 aa12.42□□□□□ -0.42
CHMP4A-204ENST00000530996 TXNL1O43396 289 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 ELANEP08246 267 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 SLC2A2P11168 524 aaPredicted RBP12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 SOX6P35712 828 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 EBI3Q14213 229 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 SLC22A6Q4U2R8 563 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 FAM53AQ6NSI3 398 aaPredicted RBP12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 ZNF529Q6P280 563 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 Q8N6K4 173 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 OR52M1Q8NGK5 317 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 OR52I1Q8NGK6 324 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 C4orf3Q8WVX3 66 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 S1PR3Q99500 378 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 ASCL2Q99929 193 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 HSPB9Q9BQS6 159 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 IFT22Q9H7X7 185 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 RAB9BQ9NP90 201 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 TMEM138Q9NPI0 162 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 IL36GQ9NZH8 169 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 TRAPPC2LQ9UL33 140 aa12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 RPL36Q9Y3U8 105 aaKnown RBP12.41□□□□□ -0.42
CHMP4A-204ENST00000530996 RYR3Q15413 4870 aa12.4□□□□□ -0.42
CHMP4A-204ENST00000530996 C15orf65H3BRN8 121 aa12.4□□□□□ -0.42
CHMP4A-204ENST00000530996 SPINT2O43291 252 aa12.4□□□□□ -0.42
CHMP4A-204ENST00000530996 CD1BP29016 333 aa12.4□□□□□ -0.42
CHMP4A-204ENST00000530996 BDKRB2P30411 391 aa12.4□□□□□ -0.42
CHMP4A-204ENST00000530996 RIPK1Q13546 671 aa12.4□□□□□ -0.42
CHMP4A-204ENST00000530996 MPV17LQ2QL34 196 aa12.4□□□□□ -0.42
CHMP4A-204ENST00000530996 ZNF260Q3ZCT1 412 aa12.4□□□□□ -0.42
CHMP4A-204ENST00000530996 NHLRC3Q5JS37 347 aa12.4□□□□□ -0.42
CHMP4A-204ENST00000530996 CKLFQ9UBR5 152 aa12.4□□□□□ -0.42
CHMP4A-204ENST00000530996 ZNF107Q9UII5 783 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms