RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 PILRAQ9UKJ1 303 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 LOC101059948A0A1B0GTJ6 334 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF891A8MT65 544 aaPredicted RBP7□□□□□ -1.29
CSDE1-214ENST00000530886 TAX1BP3O14907 124 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 B3GALT2O43825 422 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 IFNA5P01569 189 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 CCL1P22362 96 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 LGALS7P47929 136 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 HINT1P49773 126 aaPredicted RBP7□□□□□ -1.29
CSDE1-214ENST00000530886 FMODQ06828 376 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 Q6ZVH6 145 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 TCEAL8Q8IYN2 117 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 CADM4Q8NFZ8 388 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 OR4P4Q8NGL7 312 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 THAP3Q8WTV1 239 aaPredicted RBP7□□□□□ -1.29
CSDE1-214ENST00000530886 C11orf40Q8WZ69 217 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 FAM3CQ92520 227 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 DYRK2Q92630 601 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF878C9JN71 531 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 SLC16A7O60669 478 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 CTLA4P16410 223 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 CRISP2P16562 243 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF133P52736 654 aaPredicted RBP7□□□□□ -1.29
CSDE1-214ENST00000530886 PRRX1P54821 245 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 CLDN15P56746 228 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 PMCHL1Q16048 86 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 CPEB4Q17RY0 729 aaKnown RBP eCLIP7□□□□□ -1.29
CSDE1-214ENST00000530886 FAM78BQ5VT40 261 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 OR52L2PQ8NGH6 319 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 MRPL30Q8TCC3 161 aaKnown RBP7□□□□□ -1.29
CSDE1-214ENST00000530886 PSMF1Q92530 271 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 FGF14Q92915 247 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 KLHDC3Q9BQ90 382 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 MEGF9Q9H1U4 602 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 TXNIPQ9H3M7 391 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 BANF2Q9H503 90 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 TUBG2Q9NRH3 451 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 PSG11Q9UQ72 335 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 VDAC3Q9Y277 283 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 HCFC2Q9Y5Z7 792 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 THADAQ6YHU6 1953 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 TRBV9A0A0B4J1U6 114 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 NKX2-6A6NCS4 301 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 LIPT2A6NK58 231 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 C17orf105B2RV13 164 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 SIRPB1O00241 398 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 CNOT4O95628 575 aaKnown RBP7□□□□□ -1.29
CSDE1-214ENST00000530886 MT-ATP6P00846 226 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 ANOS1P23352 680 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 CMPK1P30085 196 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 PAX9P55771 341 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 PAX2Q02962 417 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 FFAR4Q5NUL3 377 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF468Q5VIY5 522 aaPredicted RBP7□□□□□ -1.29
CSDE1-214ENST00000530886 SIGLECL1Q8N7X8 197 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 OR51T1Q8NGJ9 327 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 VSTM2LQ96N03 204 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 LRFN3Q9BTN0 628 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 PBOV1Q9GZY1 135 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 TMEM222Q9H0R3 208 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 RNF24Q9Y225 148 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 RNF114Q9Y508 228 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 TIMM9Q9Y5J7 89 aa7□□□□□ -1.29
CSDE1-214ENST00000530886 TMEM50AO95807 157 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 CEACAM3P40198 252 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 PSMB3P49720 205 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 SGCBQ16585 318 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 OR10J3Q5JRS4 329 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 SPIN3Q5JUX0 258 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 DEFB125Q8N687 156 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 OR4N2Q8NGD1 307 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 FAM216AQ8WUB2 273 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 DNAJA3Q96EY1 480 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 LOC102725191A0A1B0GVB3 256 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 GAGE12BA1L429 117 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 SSSCA1O60232 199 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 WISP1O95388 367 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 CISD3P0C7P0 127 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF20P17024 532 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 KITLGP21583 273 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 RHOBP62745 196 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 TMEM52BQ4KMG9 183 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 NMSQ5H8A3 153 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 LCN15Q6UWW0 184 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 C19orf35Q6ZS72 473 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 ZDHHC11Q9H8X9 412 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 PATZ1Q9HBE1 687 aaKnown RBP6.99□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF286AQ9HBT8 521 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF160Q9HCG1 818 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 MCTS1Q9ULC4 181 aaKnown RBP6.99□□□□□ -1.29
CSDE1-214ENST00000530886 C17orf112F2Z3M2 114 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 ONECUT2O95948 504 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 CGAP01215 116 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF10P21506 573 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-214ENST00000530886 OMGP23515 440 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 BLVRBP30043 206 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-214ENST00000530886 OR4A47Q6IF82 309 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 CYB5D2Q8WUJ1 264 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 CLEC1BQ9P126 229 aa6.99□□□□□ -1.29
CSDE1-214ENST00000530886 KIAA2026Q5HYC2 2103 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms