RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 IGHV1-8P0DP01 117 aa13.13□□□□□ -0.31
BRK1-201ENST00000530758 ZNF260Q3ZCT1 412 aa13.13□□□□□ -0.31
BRK1-201ENST00000530758 MZT2AQ6P582 158 aa13.13□□□□□ -0.31
BRK1-201ENST00000530758 TRAT1Q6PIZ9 186 aa13.13□□□□□ -0.31
BRK1-201ENST00000530758 VMO1Q7Z5L0 202 aa13.13□□□□□ -0.31
BRK1-201ENST00000530758 RTN4RL2Q86UN3 420 aa13.13□□□□□ -0.31
BRK1-201ENST00000530758 SAMD12Q8N8I0 201 aa13.13□□□□□ -0.31
BRK1-201ENST00000530758 S100A16Q96FQ6 103 aaKnown RBP13.13□□□□□ -0.31
BRK1-201ENST00000530758 PCGF1Q9BSM1 259 aa13.13□□□□□ -0.31
BRK1-201ENST00000530758 SLIRPQ9GZT3 109 aaKnown RBP13.13□□□□□ -0.31
BRK1-201ENST00000530758 NXF2Q9GZY0 626 aaKnown RBP13.13□□□□□ -0.31
BRK1-201ENST00000530758 DIABLOQ9NR28 239 aa13.13□□□□□ -0.31
BRK1-201ENST00000530758 COMMD3Q9UBI1 195 aa13.13□□□□□ -0.31
BRK1-201ENST00000530758 AK3Q9UIJ7 227 aa13.13□□□□□ -0.31
BRK1-201ENST00000530758 A0A087X0M5 115 aa13.12□□□□□ -0.31
BRK1-201ENST00000530758 A0A1B0GX30 115 aa13.12□□□□□ -0.31
BRK1-201ENST00000530758 XRCC3O43542 346 aa13.12□□□□□ -0.31
BRK1-201ENST00000530758 MELTFP08582 738 aa13.12□□□□□ -0.31
BRK1-201ENST00000530758 ERVFRD-1P60508 538 aa13.12□□□□□ -0.31
BRK1-201ENST00000530758 PNLIPRP3Q17RR3 467 aa13.12□□□□□ -0.31
BRK1-201ENST00000530758 CDNFQ49AH0 187 aa13.12□□□□□ -0.31
BRK1-201ENST00000530758 NCR3LG1Q68D85 454 aa13.12□□□□□ -0.31
BRK1-201ENST00000530758 HCP5Q6MZN7 132 aa13.12□□□□□ -0.31
BRK1-201ENST00000530758 Q6ZPA2 131 aa13.12□□□□□ -0.31
BRK1-201ENST00000530758 C9orf139Q6ZV77 190 aa13.12□□□□□ -0.31
BRK1-201ENST00000530758 TRAPPC6BQ86SZ2 158 aa13.12□□□□□ -0.31
BRK1-201ENST00000530758 OR4K15Q8NH41 348 aa13.12□□□□□ -0.31
BRK1-201ENST00000530758 BEX2Q9BXY8 128 aa13.12□□□□□ -0.31
BRK1-201ENST00000530758 HEXA-AS1Q9H8Q6 139 aa13.12□□□□□ -0.31
BRK1-201ENST00000530758 ING3Q9NXR8 418 aa13.12□□□□□ -0.31
BRK1-201ENST00000530758 MXRA5Q9NR99 2828 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 CCDC160A6NGH7 325 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 A6NHS1 94 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 RNASEK-C17orf49H0YIS7 233 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 CLPXO76031 633 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 GNB3P16520 340 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 UBE2E1P51965 193 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 SRSF7Q16629 238 aaKnown RBP eCLIP13.11□□□□□ -0.31
BRK1-201ENST00000530758 CHRFAM7AQ494W8 412 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 C6orf183Q5T699 404 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 HACD4Q5VWC8 232 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 OLFML2AQ68BL7 652 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 OR52W1Q6IF63 320 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 OR52M1Q8NGK5 317 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 MRGPRDQ8TDS7 321 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 PHF21AQ96BD5 680 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 CMSS1Q9BQ75 279 aaKnown RBP13.11□□□□□ -0.31
BRK1-201ENST00000530758 SIRT7Q9NRC8 400 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 CALYQ9NYX4 217 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 NUP50Q9UKX7 468 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 TRAPPC2LQ9UL33 140 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 SESN1Q9Y6P5 492 aa13.11□□□□□ -0.31
BRK1-201ENST00000530758 MEX3AA1L020 520 aaKnown RBP13.1□□□□□ -0.31
BRK1-201ENST00000530758 F2RL2O00254 374 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 MMP23AO75900 390 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 TPPPO94811 219 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 EIF4EP06730 217 aaKnown RBP13.1□□□□□ -0.31
BRK1-201ENST00000530758 IGHV4-38-2P0DP08 117 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 RCC1P18754 421 aaPredicted RBP13.1□□□□□ -0.31
BRK1-201ENST00000530758 CDK2P24941 298 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 CD34P28906 385 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 PITPNAQ00169 270 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 GUCA2AQ02747 115 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 TMEM30BQ3MIR4 351 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 FOXB2Q5VYV0 432 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 Q6ZS49 121 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 MOB1BQ7L9L4 216 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 OR11H6Q8NGC7 330 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 CCDC107Q8WV48 283 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 LHX4Q969G2 390 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 KIRREL1Q96J84 757 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 Q9N2K0 584 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 RAB9BQ9NP90 201 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 C12orf4Q9NQ89 552 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 MGAT4AQ9UM21 535 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 A3GALT2U3KPV4 340 aa13.1□□□□□ -0.31
BRK1-201ENST00000530758 FBN1P35555 2871 aaKnown RBP13.1□□□□□ -0.31
BRK1-201ENST00000530758 TRAV18A0A075B6X5 111 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 TRAV39A0A0B4J263 110 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 IGHV1-69DA0A0B4J2H0 117 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 C12orf77C9JDV5 145 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 HPGDSO60760 199 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 IGHV1-69P01742 117 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 CD3GP09693 182 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 ELK1P19419 428 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 SSTR5P35346 364 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 GDNFP39905 211 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 MNDAP41218 407 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 GLP1RP43220 463 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 HMGN3Q15651 99 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 GPR157Q5UAW9 335 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 ARL11Q969Q4 196 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 HDHD3Q9BSH5 251 aaPredicted RBP13.09□□□□□ -0.31
BRK1-201ENST00000530758 TMEM133Q9H2Q1 129 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 AUNIPQ9H7T9 357 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 ZMAT3Q9HA38 289 aaKnown RBP13.09□□□□□ -0.31
BRK1-201ENST00000530758 TAF9BQ9HBM6 251 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 IDI2-AS1Q9NZ38 188 aa13.09□□□□□ -0.31
BRK1-201ENST00000530758 TRAV40A0A0B4J280 105 aa13.08□□□□□ -0.32
BRK1-201ENST00000530758 CTDSP2O14595 271 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms