RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 RPLP1P05386 114 aaKnown RBP16.31■□□□□ 0.2
TSPAN4-219ENST00000530404 SERPINA2P20848 420 aa16.31■□□□□ 0.2
TSPAN4-219ENST00000530404 KCNJ3P48549 501 aa16.31■□□□□ 0.2
TSPAN4-219ENST00000530404 PAX5Q02548 391 aa16.31■□□□□ 0.2
TSPAN4-219ENST00000530404 Q8NFD4 153 aa16.31■□□□□ 0.2
TSPAN4-219ENST00000530404 OR10A7Q8NGE5 316 aa16.31■□□□□ 0.2
TSPAN4-219ENST00000530404 CPNE2Q96FN4 548 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-219ENST00000530404 WWC2-AS2Q96NR7 200 aa16.31■□□□□ 0.2
TSPAN4-219ENST00000530404 MYCBPQ99417 103 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-219ENST00000530404 A0A1W2PP11 408 aa16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 H0YHG0 523 aa16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 C15orf65H3BRN8 121 aa16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 GEMIN2O14893 280 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 GAPDHP04406 335 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 GPR12P47775 334 aa16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 LUMP51884 338 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 RBM11P57052 281 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 EBI3Q14213 229 aa16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 ATAD3CQ5T2N8 411 aa16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 UNQ9370/PRO34162Q6UXP9 181 aa16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 ASCL4Q6XD76 172 aa16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 SLC16A12Q6ZSM3 486 aa16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 COMMD1Q8N668 190 aa16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 Q8N9W7 124 aa16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 RHOXF1Q8NHV9 184 aa16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 ARL11Q969Q4 196 aa16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 METTL9Q9H1A3 318 aa16.3■□□□□ 0.2
TSPAN4-219ENST00000530404 TMEM30CPA0ZSE6 113 aa16.29■□□□□ 0.2
TSPAN4-219ENST00000530404 ZNF736B4DX44 427 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-219ENST00000530404 CCL24O00175 119 aa16.29■□□□□ 0.2
TSPAN4-219ENST00000530404 SDCBPO00560 298 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-219ENST00000530404 SLC31A2O15432 143 aa16.29■□□□□ 0.2
TSPAN4-219ENST00000530404 LIMS3P0CW19 117 aa16.29■□□□□ 0.2
TSPAN4-219ENST00000530404 LIMS4P0CW20 117 aa16.29■□□□□ 0.2
TSPAN4-219ENST00000530404 DGCR2P98153 550 aa16.29■□□□□ 0.2
TSPAN4-219ENST00000530404 RAB40BQ12829 278 aa16.29■□□□□ 0.2
TSPAN4-219ENST00000530404 MRPL28Q13084 256 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-219ENST00000530404 DDI2Q5TDH0 399 aa16.29■□□□□ 0.2
TSPAN4-219ENST00000530404 Q8N6K4 173 aa16.29■□□□□ 0.2
TSPAN4-219ENST00000530404 OR52N1Q8NH53 320 aa16.29■□□□□ 0.2
TSPAN4-219ENST00000530404 APH1BQ8WW43 257 aa16.29■□□□□ 0.2
TSPAN4-219ENST00000530404 ABCG5Q9H222 651 aa16.29■□□□□ 0.2
TSPAN4-219ENST00000530404 DCLRE1BQ9H816 532 aa16.29■□□□□ 0.2
TSPAN4-219ENST00000530404 AP4M1O00189 453 aa16.28■□□□□ 0.2
TSPAN4-219ENST00000530404 CSTBP04080 98 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-219ENST00000530404 SLC6A1P30531 599 aa16.28■□□□□ 0.2
TSPAN4-219ENST00000530404 TEX38Q6PEX7 206 aa16.28■□□□□ 0.2
TSPAN4-219ENST00000530404 TGIF2LXQ8IUE1 241 aa16.28■□□□□ 0.2
TSPAN4-219ENST00000530404 IZUMO1Q8IYV9 350 aa16.28■□□□□ 0.2
TSPAN4-219ENST00000530404 OR13C5Q8NGS8 318 aa16.28■□□□□ 0.2
TSPAN4-219ENST00000530404 OR2T10Q8NGZ9 312 aa16.28■□□□□ 0.2
TSPAN4-219ENST00000530404 GPR148Q8TDV2 347 aa16.28■□□□□ 0.2
TSPAN4-219ENST00000530404 NEK7Q8TDX7 302 aa16.28■□□□□ 0.2
TSPAN4-219ENST00000530404 TMEM106AQ96A25 262 aa16.28■□□□□ 0.2
TSPAN4-219ENST00000530404 Q96MT0 163 aa16.28■□□□□ 0.2
TSPAN4-219ENST00000530404 PRR25Q96S07 402 aa16.28■□□□□ 0.2
TSPAN4-219ENST00000530404 SLC29A1Q99808 456 aa16.28■□□□□ 0.2
TSPAN4-219ENST00000530404 GFOD1Q9NXC2 390 aa16.28■□□□□ 0.2
TSPAN4-219ENST00000530404 CD2P06729 351 aa16.27■□□□□ 0.2
TSPAN4-219ENST00000530404 GZMHP20718 246 aa16.27■□□□□ 0.2
TSPAN4-219ENST00000530404 ZNF93P35789 620 aaPredicted RBP16.27■□□□□ 0.2
TSPAN4-219ENST00000530404 GPR50Q13585 617 aa16.27■□□□□ 0.2
TSPAN4-219ENST00000530404 SMN1Q16637 294 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-219ENST00000530404 PNLIPRP3Q17RR3 467 aa16.27■□□□□ 0.2
TSPAN4-219ENST00000530404 OR2G6Q5TZ20 316 aa16.27■□□□□ 0.2
TSPAN4-219ENST00000530404 RTN4IP1Q8WWV3 396 aaPredicted RBP16.27■□□□□ 0.2
TSPAN4-219ENST00000530404 HSPB9Q9BQS6 159 aa16.27■□□□□ 0.2
TSPAN4-219ENST00000530404 IFT22Q9H7X7 185 aa16.27■□□□□ 0.2
TSPAN4-219ENST00000530404 PLSCR3Q9NRY6 295 aa16.27■□□□□ 0.2
TSPAN4-219ENST00000530404 LIN7CQ9NUP9 197 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-219ENST00000530404 IL36GQ9NZH8 169 aa16.27■□□□□ 0.2
TSPAN4-219ENST00000530404 RPL36Q9Y3U8 105 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-219ENST00000530404 SIRT4Q9Y6E7 314 aaPredicted RBP16.27■□□□□ 0.2
TSPAN4-219ENST00000530404 DNAH7Q8WXX0 4024 aa16.27■□□□□ 0.2
TSPAN4-219ENST00000530404 SORL1Q92673 2214 aa16.27■□□□□ 0.19
TSPAN4-219ENST00000530404 LOC100130705A0A1B0GUX0 176 aa16.26■□□□□ 0.19
TSPAN4-219ENST00000530404 MPZL2O60487 215 aa16.26■□□□□ 0.19
TSPAN4-219ENST00000530404 ETV1P50549 477 aa16.26■□□□□ 0.19
TSPAN4-219ENST00000530404 CXorf66Q5JRM2 361 aaPredicted RBP16.26■□□□□ 0.19
TSPAN4-219ENST00000530404 NHLRC3Q5JS37 347 aa16.26■□□□□ 0.19
TSPAN4-219ENST00000530404 LINC00311Q8N616 119 aa16.26■□□□□ 0.19
TSPAN4-219ENST00000530404 TMEM104Q8NE00 496 aa16.26■□□□□ 0.19
TSPAN4-219ENST00000530404 CYYR1Q96J86 154 aa16.26■□□□□ 0.19
TSPAN4-219ENST00000530404 S100A13Q99584 98 aa16.26■□□□□ 0.19
TSPAN4-219ENST00000530404 TMEM138Q9NPI0 162 aa16.26■□□□□ 0.19
TSPAN4-219ENST00000530404 MRPS18AQ9NVS2 196 aaKnown RBP16.26■□□□□ 0.19
TSPAN4-219ENST00000530404 MAGEA13PA6NCF6 341 aa16.25■□□□□ 0.19
TSPAN4-219ENST00000530404 AIPO00170 330 aa16.25■□□□□ 0.19
TSPAN4-219ENST00000530404 BDKRB2P30411 391 aa16.25■□□□□ 0.19
TSPAN4-219ENST00000530404 F2RL1P55085 397 aa16.25■□□□□ 0.19
TSPAN4-219ENST00000530404 PPP3R1P63098 170 aa16.25■□□□□ 0.19
TSPAN4-219ENST00000530404 SLC22A6Q4U2R8 563 aa16.25■□□□□ 0.19
TSPAN4-219ENST00000530404 RPL22L1Q6P5R6 122 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-219ENST00000530404 OR10V1Q8NGI7 309 aa16.25■□□□□ 0.19
TSPAN4-219ENST00000530404 OR52M1Q8NGK5 317 aa16.25■□□□□ 0.19
TSPAN4-219ENST00000530404 ST6GALNAC6Q969X2 333 aa16.25■□□□□ 0.19
TSPAN4-219ENST00000530404 S1PR3Q99500 378 aa16.25■□□□□ 0.19
TSPAN4-219ENST00000530404 RASL11BQ9BPW5 248 aa16.25■□□□□ 0.19
TSPAN4-219ENST00000530404 MOSP00540 346 aa16.24■□□□□ 0.19
TSPAN4-219ENST00000530404 MT-ND4P03905 459 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms