RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 IGHV3-21A0A0B4J1V1 117 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 IGHV3-43A0A0B4J1X8 118 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 A0A1B0GXF2 115 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 RAB19A4D1S5 217 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 MGAT4DA6NG13 374 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 LEUTXA8MZ59 168 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 hCG_2039718K7EN88 272 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 PSMD11O00231 422 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 E2F6O75461 281 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 CPSF4O95639 269 aaKnown RBP2.78□□□□□ -1.96
CASP4-208ENST00000530309 S100A9P06702 114 aaKnown RBP2.78□□□□□ -1.96
CASP4-208ENST00000530309 SOD3P08294 240 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 CECR9P0C854 216 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 GIMD1P0DJR0 217 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 SCGB1C2P0DMR2 95 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 PRTN3P24158 256 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 HSPA9P38646 679 aaKnown RBP2.78□□□□□ -1.96
CASP4-208ENST00000530309 GNGT1P63211 74 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 ZNF141Q15928 474 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 C18orf21Q32NC0 220 aaPredicted RBP2.78□□□□□ -1.96
CASP4-208ENST00000530309 TMEM215Q68D42 235 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 GLYATQ6IB77 296 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 HCP5Q6MZN7 132 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 TPGS1Q6ZTW0 290 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 COMTD1Q86VU5 262 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 CPNE9Q8IYJ1 553 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 SLC35F6Q8N357 371 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 OR8G5Q8NG78 346 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 SCGB1C1Q8TD33 95 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 NELFBQ8WX92 580 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.78□□□□□ -1.96
CASP4-208ENST00000530309 CCL17Q92583 94 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 TLCD1Q96CP7 247 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 MSANTD3Q96H12 275 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 ANAPC13Q9BS18 74 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 TIPINQ9BVW5 301 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 TXNIPQ9H3M7 391 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 POMKQ9H5K3 350 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 PLEKHA1Q9HB21 404 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 TMBIM4Q9HC24 238 aa2.78□□□□□ -1.96
CASP4-208ENST00000530309 C14orf166Q9Y224 244 aaKnown RBP2.78□□□□□ -1.96
CASP4-208ENST00000530309 TCHHQ07283 1943 aa2.78□□□□□ -1.97
CASP4-208ENST00000530309 NEO1Q92859 1461 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 CHD2O14647 1828 aaKnown RBP2.77□□□□□ -1.97
CASP4-208ENST00000530309 QRICH2Q9H0J4 1663 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 BIRC5O15392 142 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 SPOPO43791 374 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 IGHV3-53P01767 116 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 TRGV3P03979 118 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 GYPCP04921 128 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 M6PRP20645 277 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 FOXA1P55317 472 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 NCALDP61601 193 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 RBM45Q8IUH3 476 aaKnown RBP2.77□□□□□ -1.97
CASP4-208ENST00000530309 ZFP82Q8N141 532 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 C3orf22Q8N5N4 141 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 CCDC12Q8WUD4 166 aaPredicted RBP2.77□□□□□ -1.97
CASP4-208ENST00000530309 ATP6V1G3Q96LB4 118 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 SIKE1Q9BRV8 207 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 TMEM109Q9BVC6 243 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 PRRG3Q9BZD7 231 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 CLEC2DQ9UHP7 191 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 DEPDC5O75140 1603 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 DIP2AQ14689 1571 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 MED1Q15648 1581 aaPredicted RBP2.77□□□□□ -1.97
CASP4-208ENST00000530309 PXDNLA1KZ92 1463 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 MRC1P22897 1456 aa2.77□□□□□ -1.97
CASP4-208ENST00000530309 A0A1W2PP64 1363 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 LOXHD1Q8IVV2 1947 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 LTBP4Q8N2S1 1624 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 VPS37CA5D8V6 355 aaPredicted RBP2.76□□□□□ -1.97
CASP4-208ENST00000530309 ZNF729A6NN14 1252 aaPredicted RBP2.76□□□□□ -1.97
CASP4-208ENST00000530309 F5H5P2 479 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 MYO1DO94832 1006 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 IGHMP01871 453 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 NQO1P15559 274 aaKnown RBP2.76□□□□□ -1.97
CASP4-208ENST00000530309 ALDH3A1P30838 453 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 GCLMP48507 274 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 TTPAP49638 278 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 SPCS2Q15005 226 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 UAP1Q16222 522 aaPredicted RBP2.76□□□□□ -1.97
CASP4-208ENST00000530309 KRTAP25-1Q3LHN0 102 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 ERICH5Q6P6B1 374 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 CCDC121Q6ZUS5 278 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 DPPA2Q7Z7J5 298 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 SPICQ8N5J4 248 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 OR2M3Q8NG83 312 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 ERMNQ8TAM6 284 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 OPTNQ96CV9 577 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 IGF2BP2-AS1Q96M15 143 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 BIRC8Q96P09 236 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 TSC22D3Q99576 134 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 CGREF1Q99674 301 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 ZNF436Q9C0F3 470 aaPredicted RBP2.76□□□□□ -1.97
CASP4-208ENST00000530309 HAUS4Q9H6D7 363 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 RHOFQ9HBH0 211 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 ZNF586Q9NXT0 402 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 ARHGAP5Q13017 1502 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 PTPRMP28827 1452 aa2.76□□□□□ -1.97
CASP4-208ENST00000530309 THADAQ6YHU6 1953 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms