RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 HOPXQ9BPY8 73 aaPredicted RBP2.37□□□□□ -2.03
CTR9-204ENST00000529355 VPS25Q9BRG1 176 aa2.37□□□□□ -2.03
CTR9-204ENST00000529355 ZNF426Q9BUY5 554 aa2.37□□□□□ -2.03
CTR9-204ENST00000529355 OR52D1Q9H346 318 aa2.37□□□□□ -2.03
CTR9-204ENST00000529355 FAM96AQ9H5X1 160 aa2.37□□□□□ -2.03
CTR9-204ENST00000529355 DHX35Q9H5Z1 703 aaKnown RBP2.37□□□□□ -2.03
CTR9-204ENST00000529355 EDA2RQ9HAV5 297 aa2.37□□□□□ -2.03
CTR9-204ENST00000529355 CACYBPQ9HB71 228 aaKnown RBP2.37□□□□□ -2.03
CTR9-204ENST00000529355 FAM49BQ9NUQ9 324 aa2.37□□□□□ -2.03
CTR9-204ENST00000529355 AHSPQ9NZD4 102 aa2.37□□□□□ -2.03
CTR9-204ENST00000529355 PITPNC1Q9UKF7 332 aa2.37□□□□□ -2.03
CTR9-204ENST00000529355 ANGPT4Q9Y264 503 aa2.37□□□□□ -2.03
CTR9-204ENST00000529355 HSPB11Q9Y547 144 aa2.37□□□□□ -2.03
CTR9-204ENST00000529355 CAMSAP1Q5T5Y3 1602 aa2.37□□□□□ -2.03
CTR9-204ENST00000529355 NEO1Q92859 1461 aa2.37□□□□□ -2.03
CTR9-204ENST00000529355 CDK12Q9NYV4 1490 aaPredicted RBP2.37□□□□□ -2.03
CTR9-204ENST00000529355 KIF13AQ9H1H9 1805 aa2.37□□□□□ -2.03
CTR9-204ENST00000529355 LRRC7Q96NW7 1537 aa2.37□□□□□ -2.03
CTR9-204ENST00000529355 BCORL1Q5H9F3 1711 aa2.37□□□□□ -2.03
CTR9-204ENST00000529355 TRPM3Q9HCF6 1732 aaPredicted RBP2.37□□□□□ -2.03
CTR9-204ENST00000529355 TMEM2Q9UHN6 1383 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 PREX2Q70Z35 1606 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 TRAV8-7A0A075B6U6 113 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 KCNE1BA0A087WTH5 132 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 A0A0G2JMP0 313 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 OR11H12B2RN74 326 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 SEC14L6B5MCN3 397 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 DISC1C4P0D8 188 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 SMLR1H3BR10 107 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 K7ERU9 68 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 M0R143 59 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 COPEO14579 308 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 OR2J2O76002 312 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 GLSO94925 669 aaPredicted RBP2.36□□□□□ -2.03
CTR9-204ENST00000529355 YIF1AO95070 293 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 TNFSF15O95150 251 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 CYB5R3P00387 301 aaPredicted RBP2.36□□□□□ -2.03
CTR9-204ENST00000529355 PDYNP01213 254 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 IGLV3-19P01714 112 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 HLA-EP13747 358 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 GABRA1P14867 456 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 F2RP25116 425 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 GGT2P36268 569 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 OPRK1P41145 380 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 XKP51811 444 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 ACLYP53396 1101 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 DNAJB13P59910 316 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 LSM6P62312 80 aaKnown RBP2.36□□□□□ -2.03
CTR9-204ENST00000529355 PPP3R1P63098 170 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 AESQ08117 197 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 SIGLEC14Q08ET2 396 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 INCA1Q0VD86 236 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 SRSF6Q13247 344 aaKnown RBP2.36□□□□□ -2.03
CTR9-204ENST00000529355 OR8G1Q15617 311 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 PRSS8Q16651 343 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 PGGHGQ32M88 737 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 SMIM21Q3B7S5 101 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 RBM48Q5RL73 367 aaKnown RBP2.36□□□□□ -2.03
CTR9-204ENST00000529355 TPRG1LQ5T0D9 272 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 OGFRL1Q5TC84 451 aaPredicted RBP2.36□□□□□ -2.03
CTR9-204ENST00000529355 SLC8B1Q6J4K2 584 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 APOBEC3HQ6NTF7 200 aaKnown RBP2.36□□□□□ -2.03
CTR9-204ENST00000529355 DNM1P34Q6PK57 102 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 MBOAT1Q6ZNC8 495 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 SSX7Q7RTT5 188 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 TCF24Q7RTU0 167 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 SLC16A13Q7RTY0 426 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 SCD5Q86SK9 330 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 UNC93AQ86WB7 457 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 WDFY1Q8IWB7 410 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 GABRG1Q8N1C3 465 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 LYPD1Q8N2G4 141 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 ARRDC1Q8N5I2 433 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 ACBD7Q8N6N7 88 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 FBXO36Q8NEA4 188 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 ATP6V1C2Q8NEY4 427 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 OR11H1Q8NG94 326 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 OR9Q1Q8NGQ5 310 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 OR11H2Q8NH07 326 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 OR4C6Q8NH72 309 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 CD200R1Q8TD46 325 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 CASTOR1Q8WTX7 329 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 PHF10Q8WUB8 498 aaKnown RBP2.36□□□□□ -2.03
CTR9-204ENST00000529355 RAB2BQ8WUD1 216 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 SKA2Q8WVK7 121 aaPredicted RBP2.36□□□□□ -2.03
CTR9-204ENST00000529355 TMEM239Q8WW34 195 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 DNAJB3Q8WWF6 145 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 FAM131CQ96AQ9 280 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 ISOC1Q96CN7 298 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 HYLS1Q96M11 299 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 Q96MT0 163 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 TMEM56Q96MV1 263 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 VAT1Q99536 393 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 TSNAXQ99598 290 aaKnown RBP2.36□□□□□ -2.03
CTR9-204ENST00000529355 TMEM208Q9BTX3 173 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 TMEM109Q9BVC6 243 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 PORCNQ9H237 461 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 DCSTAMPQ9H295 470 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 BOLA2Q9H3K6 86 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 ELOVL6Q9H5J4 265 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms