RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 ENDOGQ14249 297 aaKnown RBP1.86□□□□□ -2.11
BRCA2-203ENST00000528762 PAFAH1B3Q15102 231 aaKnown RBP1.86□□□□□ -2.11
BRCA2-203ENST00000528762 TMEM241Q24JQ0 296 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 TMEM69Q5SWH9 247 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 TTC33Q6PID6 262 aaPredicted RBP1.86□□□□□ -2.11
BRCA2-203ENST00000528762 DNM1P34Q6PK57 102 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 FAM131AQ6UXB0 335 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 C16orf47Q6ZP98 133 aaPredicted RBP1.86□□□□□ -2.11
BRCA2-203ENST00000528762 FAM19A5Q7Z5A7 132 aaPredicted RBP1.86□□□□□ -2.11
BRCA2-203ENST00000528762 AMN1Q8IY45 258 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 RNF182Q8N6D2 247 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 OR8J2Q8NGG1 315 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 OR52E4Q8NGH9 312 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 OR4P4Q8NGL7 312 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 OR8S1Q8NH09 359 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 SMIM19Q96E16 107 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 CHST5Q9GZS9 411 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 NSRP1Q9H0G5 558 aaKnown RBP1.86□□□□□ -2.11
BRCA2-203ENST00000528762 VSIRQ9H7M9 311 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 UCK1Q9HA47 277 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 BTRCQ9Y297 605 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 ATAD5Q96QE3 1844 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 CLUHO75153 1309 aa1.86□□□□□ -2.11
BRCA2-203ENST00000528762 SSH2Q76I76 1423 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 RIMS2Q9UQ26 1411 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 IGHV3-43A0A0B4J1X8 118 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 GOLGA6L4A6NEF3 574 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 LEUTXA8MZ59 168 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 AZIN1O14977 448 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 AHSA1O95433 338 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 ASS1P00966 412 aaKnown RBP1.85□□□□□ -2.11
BRCA2-203ENST00000528762 PFN1P07737 140 aaKnown RBP1.85□□□□□ -2.11
BRCA2-203ENST00000528762 CGB3P0DN86 165 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 CGB7P0DN87 165 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 SKP2Q13309 424 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 HLA-DRB5Q30154 266 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 COQ5Q5HYK3 327 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 HES3Q5TGS1 186 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 KHDRBS2Q5VWX1 349 aaKnown RBP1.85□□□□□ -2.11
BRCA2-203ENST00000528762 SPINT4Q6UDR6 99 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 IGFL3Q6UXB1 125 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 DPPA2Q7Z7J5 298 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 CPNE9Q8IYJ1 553 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 DNAAF3Q8N9W5 541 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 PPCDCQ96CD2 204 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 CMTM5Q96DZ9 223 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 RBP7Q96R05 134 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 SEC22CQ9BRL7 303 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 SHANK2-AS3Q9BTD1 123 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 SLC22A4Q9H015 551 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 METTL9Q9H1A3 318 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 TRAPPC1Q9Y5R8 145 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 SHANK1Q9Y566 2161 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 CEP170Q5SW79 1584 aa1.85□□□□□ -2.11
BRCA2-203ENST00000528762 NAV1Q8NEY1 1877 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 PLB1Q6P1J6 1458 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 SEC16AO15027 2179 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 DAPL1A0PJW8 107 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 CCRL2O00421 344 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 CRTAPO75718 401 aaPredicted RBP1.84□□□□□ -2.11
BRCA2-203ENST00000528762 POP7O75817 140 aaKnown RBP1.84□□□□□ -2.11
BRCA2-203ENST00000528762 DEXIO95424 95 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 S100A2P29034 98 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 FMODQ06828 376 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 MLLT11Q13015 90 aaPredicted RBP1.84□□□□□ -2.11
BRCA2-203ENST00000528762 LY6EQ16553 131 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 DNLZQ5SXM8 178 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 KPRPQ5T749 579 aaPredicted RBP1.84□□□□□ -2.11
BRCA2-203ENST00000528762 ZFAND6Q6FIF0 208 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 IGFL1Q6UW32 110 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 VN1R4Q7Z5H5 301 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 TMEM144Q7Z5S9 345 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 OR11L1Q8NGX0 322 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 RNF133Q8WVZ7 376 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 MAL2Q969L2 176 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 TAMM41Q96BW9 452 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 SMIM12Q96EX1 92 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 PLA2G12AQ9BZM1 189 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 MS4A6AQ9H2W1 248 aa1.84□□□□□ -2.11
BRCA2-203ENST00000528762 ADGRL1O94910 1474 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 IGHV1-45A0A0A0MS14 117 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 IGHV3-21A0A0B4J1V1 117 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 F5H5P2 479 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 ZW10O43264 779 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 SOX14O95416 240 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 PSMG1O95456 288 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 FSTL3O95633 263 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 IGHG2P01859 326 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 GABRA1P14867 456 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 INPP1P49441 399 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 MP68P56378 58 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 RAB2AP61019 212 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 IHHQ14623 411 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 CASP8Q14790 479 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 CLEC12BQ2HXU8 276 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 RGS21Q2M5E4 152 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 DNAL1Q4LDG9 190 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 ELP2Q6IA86 826 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 PAGE2Q7Z2X7 111 aa1.83□□□□□ -2.12
BRCA2-203ENST00000528762 ZFP82Q8N141 532 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms