RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 FAM240BA0A1B0GVZ2 78 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TMEM30CPA0ZSE6 113 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ODAMA1E959 279 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 HMX3A6NHT5 357 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 A8MXK9 166 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 C22orf46C9J442 243 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 BOLA2-SMG1P6H3BVE0 249 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 GPR37O15354 613 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 CA11O75493 328 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 CD3GP09693 182 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 HLA-DMAP28067 261 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 LCN2P80188 198 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ZNF57Q68EA5 555 aaPredicted RBP10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TCF23Q7RTU1 214 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 AKAP14Q86UN6 197 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 OR4K15Q8NH41 348 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 CCDC107Q8WV48 283 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 DEDD2Q8WXF8 326 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TLN2Q9Y4G6 2542 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 CENPXA8MT69 81 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 GABARAPH6UMI1 98 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 LANCL1O43813 399 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 HEXAP06865 529 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 PRSS3P35030 304 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 GNG2P59768 71 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 RPL31P62899 125 aaKnown RBP10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 PLA1AQ53H76 456 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TMEM200BQ69YZ2 307 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 OR13A1Q8NGR1 328 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 C1orf159Q96HA4 380 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 SMR3AQ99954 134 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MMP28Q9H239 520 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 LPAR2Q9HBW0 351 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 C12orf4Q9NQ89 552 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 COPZ2Q9P299 210 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 RPUSD1Q9UJJ7 312 aaKnown RBP10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 RBMX2Q9Y388 322 aaKnown RBP10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ARHGAP32A7KAX9 2087 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 DOCK11Q5JSL3 2073 aa10.03□□□□□ -0.8
TRAF3IP2-211ENST00000528599 LOC105371242A0A075B767 164 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TRBV23-1A0A0A0MS06 115 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TRBV6-6A0A0A6YYG2 114 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MEIS3P1A6NDR6 274 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 H7C1Q1 480 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ECDO95905 644 aaPredicted RBP10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 FCGR3AP08637 254 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 RCC1P18754 421 aaPredicted RBP10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 PAX2Q02962 417 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ZNF273Q14593 569 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 RNASE12Q5GAN4 147 aaKnown RBP10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ZNF880Q6PDB4 577 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 C5orf24Q7Z6I8 188 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TRAPPC6BQ86SZ2 158 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 FAM185AQ8N0U4 392 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TOMM5Q8N4H5 51 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 LY6G5BQ8NDX9 201 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 C8orf46Q8TAG6 207 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 GPX8Q8TED1 209 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MAFIPQ8WZ33 124 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 DACT3Q96B18 629 aaPredicted RBP10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 CREB3L1Q96BA8 519 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 RIMS4Q9H426 269 aaPredicted RBP10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 NCOR1P1Q9H4R4 102 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 CHMP1AQ9HD42 196 aaPredicted RBP10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MMP26Q9NRE1 261 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ZNF230Q9UIE0 474 aaPredicted RBP10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TRAPPC2LQ9UL33 140 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 NF1P21359 2839 aa10.02□□□□□ -0.8
TRAF3IP2-211ENST00000528599 CSPG4Q6UVK1 2322 aa10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 ORC5O43913 435 aa10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 FOXH1O75593 365 aa10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 RAG2P55895 527 aa10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 MRPS15P82914 257 aaKnown RBP10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 DGCR2P98153 550 aa10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 MEF2CQ06413 473 aaPredicted RBP10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 CR1LQ2VPA4 569 aa10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 TMEM249Q2WGJ8 235 aa10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 CD276Q5ZPR3 534 aa10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 GVQW1Q8N7I0 195 aa10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 OR52I2Q8NH67 350 aa10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 MRGPRDQ8TDS7 321 aa10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 CORO2AQ92828 525 aa10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 OCSTAMPQ9BR26 566 aa10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 Q9N2K0 584 aa10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 MBNL3Q9NUK0 354 aaKnown RBP10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 POLR3KQ9Y2Y1 108 aaPredicted RBP10.02□□□□□ -0.81
TRAF3IP2-211ENST00000528599 YLPM1P49750 1951 aaKnown RBP10.01□□□□□ -0.81
TRAF3IP2-211ENST00000528599 NIPBLQ6KC79 2804 aaeCLIP10.01□□□□□ -0.81
TRAF3IP2-211ENST00000528599 DSCAML1Q8TD84 2053 aa10.01□□□□□ -0.81
TRAF3IP2-211ENST00000528599 NSD1Q96L73 2696 aaPredicted RBP10.01□□□□□ -0.81
TRAF3IP2-211ENST00000528599 IGKV1D-8A0A087WSZ0 117 aa10.01□□□□□ -0.81
TRAF3IP2-211ENST00000528599 TRGV10A0A0A0MS01 117 aa10.01□□□□□ -0.81
TRAF3IP2-211ENST00000528599 PPIAL4CA0A0B4J2A2 164 aa10.01□□□□□ -0.81
TRAF3IP2-211ENST00000528599 hADV38S2A0JD32 116 aa10.01□□□□□ -0.81
TRAF3IP2-211ENST00000528599 FCER2P06734 321 aa10.01□□□□□ -0.81
TRAF3IP2-211ENST00000528599 LPLP06858 475 aa10.01□□□□□ -0.81
TRAF3IP2-211ENST00000528599 PPIAL4GP0DN37 164 aa10.01□□□□□ -0.81
TRAF3IP2-211ENST00000528599 CGB3P0DN86 165 aa10.01□□□□□ -0.81
TRAF3IP2-211ENST00000528599 CGB7P0DN87 165 aa10.01□□□□□ -0.81
TRAF3IP2-211ENST00000528599 IGHV4-31P0DP07 118 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms