RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 ACOT12Q8WYK0 555 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 LINC00476Q8WZB0 136 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 PIGTQ969N2 578 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 SLC25A38Q96DW6 304 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 POM121L2Q96KW2 1035 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 HARBI1Q96MB7 349 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 ZNF75AQ96N20 296 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 TMEM246Q9BRR3 403 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 SRRQ9GZT4 340 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 TOLLIPQ9H0E2 274 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 PPP1R3EQ9H7J1 279 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 GEMIN7Q9H840 131 aaKnown RBP3.54□□□□□ -1.84
CD44-226ENST00000527889 PLEKHA1Q9HB21 404 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 GPR173Q9NS66 373 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 SLC2A8Q9NY64 477 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 MTCH1Q9NZJ7 389 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 OR6C3Q9NZP0 311 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 ABRACLQ9P1F3 81 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 MYEF2Q9P2K5 600 aaKnown RBP3.54□□□□□ -1.84
CD44-226ENST00000527889 EIF3KQ9UBQ5 218 aaKnown RBP3.54□□□□□ -1.84
CD44-226ENST00000527889 CKLFQ9UBR5 152 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 OR5V1Q9UGF6 321 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 NUP50Q9UKX7 468 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 TBC1D24Q9ULP9 559 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 FOXJ3Q9UPW0 622 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 ZNF835Q9Y2P0 537 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 RHBDD3Q9Y3P4 386 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 V9GYS6 101 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 AKAP9Q99996 3911 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.53□□□□□ -1.84
CD44-226ENST00000527889 TRGV8A0A0C4DH27 118 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 IGKV1-9A0A0C4DH69 117 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 A0A0G2JMP0 313 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 A0A0X1KG70 313 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 hCG_38984A0A1B0GV85 526 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 MEX3AA1L020 520 aaKnown RBP3.53□□□□□ -1.84
CD44-226ENST00000527889 FABP12A6NFH5 140 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 FBLL1A6NHQ2 334 aaKnown RBP3.53□□□□□ -1.84
CD44-226ENST00000527889 CGB1A6NKQ9 187 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 XRCC2O43543 280 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 SAP30O75446 220 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 UPK1BO75841 260 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 SERPINA5P05154 406 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 CRHP06850 196 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 HCKP08631 526 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 HOXD4P09016 255 aaPredicted RBP3.53□□□□□ -1.84
CD44-226ENST00000527889 CSF3P09919 207 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 CTXN2P0C2S0 81 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 CECR9P0C854 216 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 PTHLHP12272 177 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 ZNF14P17017 642 aaPredicted RBP3.53□□□□□ -1.84
CD44-226ENST00000527889 BMP5P22003 454 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 HTR2CP28335 458 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 CD80P33681 288 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 OR3A4PP47883 348 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 ZNF83P51522 516 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 EFNB2P52799 333 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 ERVS71-1P61550 626 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 ARF6P62330 175 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 FAM3AP98173 230 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 FLI1Q01543 452 aaPredicted RBP3.53□□□□□ -1.84
CD44-226ENST00000527889 ZNF45Q02386 682 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 RBPJQ06330 500 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 FGL1Q08830 312 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 RIPPLY1Q0D2K3 151 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 FOXI1Q12951 378 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 GK2Q14410 553 aaPredicted RBP3.53□□□□□ -1.84
CD44-226ENST00000527889 TAB1Q15750 504 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 UBE2V2Q15819 145 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 TBC1D28Q2M2D7 210 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 LBHQ53QV2 105 aaPredicted RBP3.53□□□□□ -1.84
CD44-226ENST00000527889 AWAT2Q6E213 333 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 OR10K2Q6IF99 312 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 FAM166AQ6J272 317 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 TEX38Q6PEX7 206 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 XKRXQ6PP77 449 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 PQLC2Q6ZP29 291 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 PGAP1Q75T13 922 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 MRPL21Q7Z2W9 205 aaKnown RBP3.53□□□□□ -1.84
CD44-226ENST00000527889 LRRC28Q86X40 367 aaPredicted RBP3.53□□□□□ -1.84
CD44-226ENST00000527889 ZDHHC23Q8IYP9 409 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 RELL2Q8NC24 303 aaPredicted RBP3.53□□□□□ -1.84
CD44-226ENST00000527889 SEMA6DQ8NFY4 1073 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 OR4M2Q8NGB6 313 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 OR51D1Q8NGF3 324 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 OR5D18Q8NGL1 313 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 OR5D14Q8NGL3 314 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 SYNPRQ8TBG9 265 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 PIGCQ92535 297 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 GTF3AQ92664 365 aaKnown RBP3.53□□□□□ -1.84
CD44-226ENST00000527889 SLC25A28Q96A46 364 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 APOBEC3DQ96AK3 386 aaPredicted RBP3.53□□□□□ -1.84
CD44-226ENST00000527889 FAM3DQ96BQ1 224 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 C8orf49Q96NF6 230 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 ZFP3Q96NJ6 502 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 GPER1Q99527 375 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 SOSTQ9BQB4 213 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 SFXN3Q9BWM7 321 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 RAB1BQ9H0U4 201 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 HIPK2Q9H2X6 1198 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms