RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ARL11Q969Q4 196 aa17.7■□□□□ 0.42
TRAPPC4-208ENST00000527680 PAK1IP1Q9NWT1 392 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC4-208ENST00000527680 ZNF581Q9P0T4 197 aa17.7■□□□□ 0.42
TRAPPC4-208ENST00000527680 IGHV3-72A0A0B4J1Y9 119 aa17.69■□□□□ 0.42
TRAPPC4-208ENST00000527680 SDCBPO00560 298 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC4-208ENST00000527680 GEMIN2O14893 280 aaKnown RBP17.69■□□□□ 0.42
TRAPPC4-208ENST00000527680 BDKRB2P30411 391 aa17.69■□□□□ 0.42
TRAPPC4-208ENST00000527680 RBM11P57052 281 aaKnown RBP17.69■□□□□ 0.42
TRAPPC4-208ENST00000527680 PAX5Q02548 391 aa17.69■□□□□ 0.42
TRAPPC4-208ENST00000527680 C18orf65Q6ZTR6 163 aa17.69■□□□□ 0.42
TRAPPC4-208ENST00000527680 KLHL30-AS1Q8NEE0 82 aa17.69■□□□□ 0.42
TRAPPC4-208ENST00000527680 ZNF555Q8NEP9 628 aa17.69■□□□□ 0.42
TRAPPC4-208ENST00000527680 UBALD1Q8TB05 177 aa17.69■□□□□ 0.42
TRAPPC4-208ENST00000527680 MCRIP2Q9BUT9 160 aaKnown RBP17.69■□□□□ 0.42
TRAPPC4-208ENST00000527680 IGHV1-3A0A0C4DH29 117 aa17.68■□□□□ 0.42
TRAPPC4-208ENST00000527680 ETV1P50549 477 aa17.68■□□□□ 0.42
TRAPPC4-208ENST00000527680 SMN1Q16637 294 aaKnown RBP17.68■□□□□ 0.42
TRAPPC4-208ENST00000527680 OR2G6Q5TZ20 316 aa17.68■□□□□ 0.42
TRAPPC4-208ENST00000527680 XAF1Q6GPH4 301 aa17.68■□□□□ 0.42
TRAPPC4-208ENST00000527680 UNQ9370/PRO34162Q6UXP9 181 aa17.68■□□□□ 0.42
TRAPPC4-208ENST00000527680 COMMD1Q8N668 190 aa17.68■□□□□ 0.42
TRAPPC4-208ENST00000527680 EAF1Q96JC9 268 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC4-208ENST00000527680 FGF20Q9NP95 211 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC4-208ENST00000527680 IGHG2P01859 326 aa17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 DCKP27707 260 aa17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 MYCNOSP40205 109 aa17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 CD69Q07108 199 aa17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 EGFEM1PQ0D2K5 195 aa17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 ZNF816Q0VGE8 651 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 SLC22A6Q4U2R8 563 aa17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 ETV3LQ6ZN32 361 aa17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 LINC00596Q86U02 117 aa17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 STPG2Q8N412 459 aa17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 STX19Q8N4C7 294 aa17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 OR2T10Q8NGZ9 312 aa17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 APH1BQ8WW43 257 aa17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 ORAI1Q96D31 301 aa17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 IFT22Q9H7X7 185 aa17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 S100A14Q9HCY8 104 aa17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 IL36GQ9NZH8 169 aa17.67■□□□□ 0.42
TRAPPC4-208ENST00000527680 DNAH3Q8TD57 4116 aa17.66■□□□□ 0.42
TRAPPC4-208ENST00000527680 IGHV3-43A0A0B4J1X8 118 aa17.66■□□□□ 0.42
TRAPPC4-208ENST00000527680 LINC01548A6NM66 108 aa17.66■□□□□ 0.42
TRAPPC4-208ENST00000527680 ZNF780AO75290 641 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC4-208ENST00000527680 BAG2O95816 211 aa17.66■□□□□ 0.42
TRAPPC4-208ENST00000527680 IGHV3-43DP0DP04 118 aa17.66■□□□□ 0.42
TRAPPC4-208ENST00000527680 GTF2F2P13984 249 aa17.66■□□□□ 0.42
TRAPPC4-208ENST00000527680 IL3RAP26951 378 aa17.66■□□□□ 0.42
TRAPPC4-208ENST00000527680 SLC6A1P30531 599 aa17.66■□□□□ 0.42
TRAPPC4-208ENST00000527680 RAB25P57735 213 aa17.66■□□□□ 0.42
TRAPPC4-208ENST00000527680 NHLRC3Q5JS37 347 aa17.66■□□□□ 0.42
TRAPPC4-208ENST00000527680 TEX38Q6PEX7 206 aa17.66■□□□□ 0.42
TRAPPC4-208ENST00000527680 ZNF695Q8IW36 515 aa17.66■□□□□ 0.42
TRAPPC4-208ENST00000527680 OR52M1Q8NGK5 317 aa17.66■□□□□ 0.42
TRAPPC4-208ENST00000527680 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.66■□□□□ 0.42
TRAPPC4-208ENST00000527680 BABAM2Q9NXR7 383 aa17.66■□□□□ 0.42
TRAPPC4-208ENST00000527680 MYL12AP19105 171 aa17.65■□□□□ 0.42
TRAPPC4-208ENST00000527680 RIPK1Q13546 671 aa17.65■□□□□ 0.42
TRAPPC4-208ENST00000527680 EBI3Q14213 229 aa17.65■□□□□ 0.42
TRAPPC4-208ENST00000527680 MPV17LQ2QL34 196 aa17.65■□□□□ 0.42
TRAPPC4-208ENST00000527680 TGIF2LXQ8IUE1 241 aa17.65■□□□□ 0.42
TRAPPC4-208ENST00000527680 PQLC1Q8N2U9 271 aa17.65■□□□□ 0.42
TRAPPC4-208ENST00000527680 DUX3Q96PT4 197 aa17.65■□□□□ 0.42
TRAPPC4-208ENST00000527680 ZNF184Q99676 751 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC4-208ENST00000527680 GON7Q9BXV9 100 aa17.65■□□□□ 0.42
TRAPPC4-208ENST00000527680 CHCHD3Q9NX63 227 aaKnown RBP17.65■□□□□ 0.42
TRAPPC4-208ENST00000527680 GFOD1Q9NXC2 390 aa17.65■□□□□ 0.42
TRAPPC4-208ENST00000527680 CKLFQ9UBR5 152 aa17.65■□□□□ 0.42
TRAPPC4-208ENST00000527680 SIRT4Q9Y6E7 314 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC4-208ENST00000527680 IRGMA1A4Y4 181 aa17.64■□□□□ 0.41
TRAPPC4-208ENST00000527680 AIPO00170 330 aa17.64■□□□□ 0.41
TRAPPC4-208ENST00000527680 AP4M1O00189 453 aa17.64■□□□□ 0.41
TRAPPC4-208ENST00000527680 OGG1O15527 345 aa17.64■□□□□ 0.41
TRAPPC4-208ENST00000527680 ORC5O43913 435 aa17.64■□□□□ 0.41
TRAPPC4-208ENST00000527680 WBP4O75554 376 aaKnown RBP17.64■□□□□ 0.41
TRAPPC4-208ENST00000527680 MT-ND4P03905 459 aa17.64■□□□□ 0.41
TRAPPC4-208ENST00000527680 GPR176Q14439 515 aa17.64■□□□□ 0.41
TRAPPC4-208ENST00000527680 PNLIPRP3Q17RR3 467 aa17.64■□□□□ 0.41
TRAPPC4-208ENST00000527680 C11orf87Q6NUJ2 197 aa17.64■□□□□ 0.41
TRAPPC4-208ENST00000527680 LINC00311Q8N616 119 aa17.64■□□□□ 0.41
TRAPPC4-208ENST00000527680 OR13C5Q8NGS8 318 aa17.64■□□□□ 0.41
TRAPPC4-208ENST00000527680 RASL11BQ9BPW5 248 aa17.64■□□□□ 0.41
TRAPPC4-208ENST00000527680 ZMAT5Q9UDW3 170 aaKnown RBP17.64■□□□□ 0.41
TRAPPC4-208ENST00000527680 TRAPPC2LQ9UL33 140 aa17.64■□□□□ 0.41
TRAPPC4-208ENST00000527680 A0A1W2PP11 408 aa17.63■□□□□ 0.41
TRAPPC4-208ENST00000527680 MCRIP1C9JLW8 97 aa17.63■□□□□ 0.41
TRAPPC4-208ENST00000527680 C15orf65H3BRN8 121 aa17.63■□□□□ 0.41
TRAPPC4-208ENST00000527680 GPR12P47775 334 aa17.63■□□□□ 0.41
TRAPPC4-208ENST00000527680 FAM53AQ6NSI3 398 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC4-208ENST00000527680 RTN4IP1Q8WWV3 396 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC4-208ENST00000527680 GHSRQ92847 366 aa17.63■□□□□ 0.41
TRAPPC4-208ENST00000527680 SMIM19Q96E16 107 aa17.63■□□□□ 0.41
TRAPPC4-208ENST00000527680 ABCG5Q9H222 651 aa17.63■□□□□ 0.41
TRAPPC4-208ENST00000527680 LIN7CQ9NUP9 197 aaKnown RBP17.63■□□□□ 0.41
TRAPPC4-208ENST00000527680 CCL24O00175 119 aa17.62■□□□□ 0.41
TRAPPC4-208ENST00000527680 SPINT2O43291 252 aa17.62■□□□□ 0.41
TRAPPC4-208ENST00000527680 MOSP00540 346 aa17.62■□□□□ 0.41
TRAPPC4-208ENST00000527680 CD1BP29016 333 aa17.62■□□□□ 0.41
TRAPPC4-208ENST00000527680 MED21Q13503 144 aa17.62■□□□□ 0.41
TRAPPC4-208ENST00000527680 CXorf66Q5JRM2 361 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms