RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 MRPS28Q9Y2Q9 187 aaKnown RBP9.57□□□□□ -0.88
SSBP3-210ENST00000525990 TMEM30CPA0ZSE6 113 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 IRGMA1A4Y4 181 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 SLC31A2O15432 143 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 IGLL1P15814 213 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 CELP19835 753 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 CAPGP40121 348 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 MNDAP41218 407 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 ARHGDIBP52566 201 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 EMX1Q04741 257 aaPredicted RBP9.56□□□□□ -0.88
SSBP3-210ENST00000525990 HES1Q14469 280 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 YIF1BQ5BJH7 314 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 FAM27D1Q5T7N8 215 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 OGFRL1Q5TC84 451 aaPredicted RBP9.56□□□□□ -0.88
SSBP3-210ENST00000525990 CCDC144NLQ6NUI1 221 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 GLIPR1L1Q6UWM5 242 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 ZNF329Q86UD4 541 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 LYPD6Q86Y78 171 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 C8orf59Q8N0T1 100 aaPredicted RBP9.56□□□□□ -0.88
SSBP3-210ENST00000525990 JAGN1Q8N5M9 183 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 PACRGLQ8N7B6 248 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 C5orf56Q8N8D9 126 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 TMEM104Q8NE00 496 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 SETD9Q8NE22 299 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 BPIFB6Q8NFQ5 453 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 OR4F17Q8NGA8 305 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 NEK7Q8TDX7 302 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 ARL11Q969Q4 196 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 AKR1E2Q96JD6 320 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 DERL3Q96Q80 235 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 OR4F4Q96R69 305 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 PSORS1C1Q9UIG5 152 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 MOB4Q9Y3A3 225 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 AMMECR1Q9Y4X0 333 aaPredicted RBP9.56□□□□□ -0.88
SSBP3-210ENST00000525990 HSPE1-MOB4S4R3N1 261 aa9.56□□□□□ -0.88
SSBP3-210ENST00000525990 TCRBV4S1A1TA0A5B7 111 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 LINC01548A6NM66 108 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 OOSP1A8MZH6 123 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 SDCBPO00560 298 aaPredicted RBP9.55□□□□□ -0.88
SSBP3-210ENST00000525990 HSD17B6O14756 317 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 GPX5O75715 221 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 IGKV1D-33P01593 117 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 IGKV1-33P01594 117 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 MT-ND4P03905 459 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 TMEM11P17152 192 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 KCNJ3P48549 501 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 GP2P55259 537 aaKnown RBP9.55□□□□□ -0.88
SSBP3-210ENST00000525990 LOXL3P58215 753 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 MADCAM1Q13477 382 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 MPV17LQ2QL34 196 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 KHDC1LQ5JSQ8 128 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 AWAT2Q6E213 333 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 SIGIRRQ6IA17 410 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 ZNF497Q6ZNH5 498 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 C18orf65Q6ZTR6 163 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 OR10X1Q8NGY0 326 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 OR4K15Q8NH41 348 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 FBLIM1Q8WUP2 373 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 CREB3L1Q96BA8 519 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 S100A13Q99584 98 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 KCNK15Q9H427 330 aa9.55□□□□□ -0.88
SSBP3-210ENST00000525990 AURKAIP1Q9NWT8 199 aaPredicted RBP9.55□□□□□ -0.88
SSBP3-210ENST00000525990 CHCHD3Q9NX63 227 aaKnown RBP9.55□□□□□ -0.88
SSBP3-210ENST00000525990 RCC2Q9P258 522 aaKnown RBP9.55□□□□□ -0.88
SSBP3-210ENST00000525990 IGHV1-3A0A0C4DH29 117 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 EFCAB10A6NFE3 127 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 ZNF736B4DX44 427 aaPredicted RBP9.54□□□□□ -0.88
SSBP3-210ENST00000525990 C12orf77C9JDV5 145 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 AIPO00170 330 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 CASQ2O14958 399 aaPredicted RBP9.54□□□□□ -0.88
SSBP3-210ENST00000525990 FAM106CPP0CH98 169 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 PF4V1P10720 104 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 GTF2F2P13984 249 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 WNT4P56705 351 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 FOXB2Q5VYV0 432 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 PRR18Q8N4B5 295 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 STX19Q8N4C7 294 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 NANOGP1Q8N7R0 232 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 OR10V1Q8NGI7 309 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 OR1L1Q8NH94 360 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 FAM46BQ96A09 425 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 SELENOIQ9C0D9 397 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 FKBP14Q9NWM8 211 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 PAK1IP1Q9NWT1 392 aaPredicted RBP9.54□□□□□ -0.88
SSBP3-210ENST00000525990 GFOD1Q9NXC2 390 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 CNOT2Q9NZN8 540 aaKnown RBP9.54□□□□□ -0.88
SSBP3-210ENST00000525990 CKLFQ9UBR5 152 aa9.54□□□□□ -0.88
SSBP3-210ENST00000525990 NKX1-2Q9UD57 310 aaPredicted RBP9.54□□□□□ -0.88
SSBP3-210ENST00000525990 TSSC4Q9Y5U2 329 aaPredicted RBP9.54□□□□□ -0.88
SSBP3-210ENST00000525990 UBE2QL1A1L167 161 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 H3BUI4 141 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 CCRL2O00421 344 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 MYL12BO14950 172 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 CRTAPO75718 401 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-210ENST00000525990 MGMTP16455 207 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 RCC1P18754 421 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-210ENST00000525990 CD33P20138 364 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 RAB7AP51149 207 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 ZNF134P52741 427 aa9.53□□□□□ -0.88
SSBP3-210ENST00000525990 TAS2R43P59537 309 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms