RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 TLX1NBP0CAT3 122 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 ZNF19P17023 458 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 CXCL3P19876 107 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 KIR3DL2P43630 455 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 ZNF83P51522 516 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 CCR6P51684 374 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 WNT4P56705 351 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 RAB2AP61019 212 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 RAB14P61106 215 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 NAA20P61599 178 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 ESRRGP62508 458 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 HPCAP84074 193 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 EBPQ15125 230 aaKnown RBP3.29□□□□□ -1.88
USP47-206ENST00000525367 MAPK14Q16539 360 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 UBE2SQ16763 222 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 RNASE13Q5GAN3 156 aaKnown RBP3.29□□□□□ -1.88
USP47-206ENST00000525367 HACD4Q5VWC8 232 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 OR10K2Q6IF99 312 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 LRRC25Q8N386 305 aaPredicted RBP3.29□□□□□ -1.88
USP47-206ENST00000525367 ZDHHC22Q8N966 263 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 ZNF555Q8NEP9 628 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 FAM57AQ8TBR7 257 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 TBL1YQ9BQ87 522 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 ZNF717Q9BY31 904 aaPredicted RBP3.29□□□□□ -1.88
USP47-206ENST00000525367 ZNF436Q9C0F3 470 aaPredicted RBP3.29□□□□□ -1.88
USP47-206ENST00000525367 EIF5A2Q9GZV4 153 aaKnown RBP3.29□□□□□ -1.88
USP47-206ENST00000525367 TLNRD1Q9H1K6 362 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 GLTPQ9NZD2 209 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 ZNF223Q9UK11 482 aaPredicted RBP3.29□□□□□ -1.88
USP47-206ENST00000525367 RAB26Q9ULW5 256 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 ZNF706Q9Y5V0 76 aaPredicted RBP3.29□□□□□ -1.88
USP47-206ENST00000525367 TMEM14AQ9Y6G1 99 aa3.29□□□□□ -1.88
USP47-206ENST00000525367 COL2A1P02458 1487 aaPredicted RBP3.28□□□□□ -1.88
USP47-206ENST00000525367 SMIM9A6NGZ8 99 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 VGLL3A8MV65 326 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 D6RAR5 112 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 HLA-DQA1P01909 254 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 CRYBA1P05813 215 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 CXCL2P19875 107 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 G0S2P27469 103 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 SPCS3P61009 180 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 LOXL1Q08397 574 aaPredicted RBP3.28□□□□□ -1.88
USP47-206ENST00000525367 LINC00303Q3SY05 128 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 VN1R4Q7Z5H5 301 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 ZBTB8OSQ8IWT0 167 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 C15orf56Q8N910 161 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 JOSD2Q8TAC2 188 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 EEF1AKMT1Q8WVE0 214 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 NARS2Q96I59 477 aaKnown RBP3.28□□□□□ -1.88
USP47-206ENST00000525367 OR7D2Q96RA2 312 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 PHB2Q99623 299 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 OR51I2Q9H344 312 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 WFDC1Q9HC57 220 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 HES4Q9HCC6 221 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 ZNF222Q9UK12 451 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 TP53TG3Q9ULZ0 132 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 HDGFL3Q9Y3E1 203 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 MMACHCQ9Y4U1 282 aa3.28□□□□□ -1.88
USP47-206ENST00000525367 YTHDF2Q9Y5A9 579 aaKnown RBP3.28□□□□□ -1.88
USP47-206ENST00000525367 PTPRKQ15262 1439 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 ADAMTS9Q9P2N4 1935 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 TRBV6-6A0A0A6YYG2 114 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 WI2-2373I1.2A0A1W2PRP0 233 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 C5orf49A4QMS7 147 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 BTNL10A8MVZ5 291 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 EVPLLA8MZ36 301 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 TMEM250H0YL14 139 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 PGRMC1O00264 195 aaKnown RBP3.27□□□□□ -1.89
USP47-206ENST00000525367 CNIH1O95406 144 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 CXorf1O96002 111 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 ATP5G1P05496 136 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 FABP1P07148 127 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 NELFEP18615 380 aaKnown RBP3.27□□□□□ -1.89
USP47-206ENST00000525367 RAB5BP61020 215 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 POLR2GP62487 172 aaKnown RBP eCLIP3.27□□□□□ -1.89
USP47-206ENST00000525367 EDDM3AQ14507 147 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 PTGES3Q15185 160 aaKnown RBP3.27□□□□□ -1.89
USP47-206ENST00000525367 TAF1AQ15573 450 aaPredicted RBP3.27□□□□□ -1.89
USP47-206ENST00000525367 MPPED2Q15777 294 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 TMEM241Q24JQ0 296 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 RNF175Q8N4F7 328 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 PXT1Q8NFP0 134 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 OR2Z1Q8NG97 314 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 OR10G2Q8NGC3 310 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 OR8A1Q8NGG7 326 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 OR51H1Q8NH63 302 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 BTF3L4Q96K17 158 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 DERL3Q96Q80 235 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 THTPAQ9BU02 230 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 MRPL40Q9NQ50 206 aaKnown RBP3.27□□□□□ -1.89
USP47-206ENST00000525367 CA10Q9NS85 328 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 FKBP14Q9NWM8 211 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 LINC00527Q9UJ94 153 aa3.27□□□□□ -1.89
USP47-206ENST00000525367 ZNF646O15015 1829 aaPredicted RBP3.27□□□□□ -1.89
USP47-206ENST00000525367 TMEM238C9JI98 176 aa3.26□□□□□ -1.89
USP47-206ENST00000525367 F5H5P2 479 aa3.26□□□□□ -1.89
USP47-206ENST00000525367 PSMD12O00232 456 aaPredicted RBP3.26□□□□□ -1.89
USP47-206ENST00000525367 IGLV3-25P01717 112 aa3.26□□□□□ -1.89
USP47-206ENST00000525367 OR4E1P0C645 316 aa3.26□□□□□ -1.89
USP47-206ENST00000525367 SEC11BP0C7V7 166 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms