RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 DHRS9Q9BPW9 319 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 DOHHQ9BU89 302 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 CHAC1Q9BUX1 264 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 SLC25A39Q9BZJ4 359 aaPredicted RBP3.77□□□□□ -1.81
SKP1-213ENST00000524288 SLC22A4Q9H015 551 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 OR51E2Q9H255 320 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 ZC4H2Q9NQZ6 224 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 SLC39A1Q9NY26 324 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 GINS2Q9Y248 185 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 ASB4Q9Y574 426 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 NINQ8N4C6 2090 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 A0A0G2JMP0 313 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 LOC105371267A0A1B0GV96 52 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 A0A1W2PRD5 423 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 LINC00862A6NCI5 91 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 SERPINE3A8MV23 424 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 LOC730098B7Z3J9 87 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 hCG_2039718K7EN88 272 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 TNFRSF11BO00300 401 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 CRYZL1O95825 349 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 HLA-DPB1P04440 258 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 C8GP07360 202 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 ADRA2AP08913 450 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 CD3GP09693 182 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 ZNF823P16415 610 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 CPN2P22792 545 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 IL32P24001 234 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 GPR1P46091 355 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 PSMD4P55036 377 aaKnown RBP3.76□□□□□ -1.81
SKP1-213ENST00000524288 AP1S2P56377 157 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 CDC42P60953 191 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 RAP1AP62834 184 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 SELENOWP63302 87 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 MRPS15P82914 257 aaKnown RBP3.76□□□□□ -1.81
SKP1-213ENST00000524288 ST3GAL4Q11206 333 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 MLLT11Q13015 90 aaPredicted RBP3.76□□□□□ -1.81
SKP1-213ENST00000524288 SLAMF1Q13291 335 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 NCF4Q15080 339 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 RPEL1Q2QD12 228 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 CCDC58Q4VC31 144 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 Q5BKY6 102 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 PTRHD1Q6GMV3 140 aaKnown RBP3.76□□□□□ -1.81
SKP1-213ENST00000524288 NOXRED1Q6NXP6 359 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 TMPRSS11AQ6ZMR5 421 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 STX19Q8N4C7 294 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 GPR26Q8NDV2 337 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 OR10G4Q8NGN3 311 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 C2orf15Q8WU43 125 aaKnown RBP3.76□□□□□ -1.81
SKP1-213ENST00000524288 SLC25A46Q96AG3 418 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 RPEQ96AT9 228 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 TM4SF18Q96CE8 201 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 LYSMD1Q96S90 227 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 HBEGFQ99075 208 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 MND1Q9BWT6 205 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 MIXL1Q9H2W2 232 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 IFI27L2Q9H2X8 130 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 UBE2ZQ9H832 354 aaPredicted RBP3.76□□□□□ -1.81
SKP1-213ENST00000524288 TPT1P8Q9HAU6 139 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 C12orf10Q9HB07 376 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 ZNF282Q9UDV7 671 aaPredicted RBP3.76□□□□□ -1.81
SKP1-213ENST00000524288 STOML2Q9UJZ1 356 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 TBX21Q9UL17 535 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 RAB23Q9ULC3 237 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 CHTOPQ9Y3Y2 248 aaKnown RBP3.76□□□□□ -1.81
SKP1-213ENST00000524288 ENPP4Q9Y6X5 453 aa3.76□□□□□ -1.81
SKP1-213ENST00000524288 MUC22E2RYF6 1773 aaPredicted RBP3.76□□□□□ -1.81
SKP1-213ENST00000524288 IGHV3-66A0A0C4DH42 116 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 A0A0D9SEW6 157 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 LOC100506127A0A0U1RQW1 187 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 A0A0X1KG70 313 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 IRGMA1A4Y4 181 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 GABRR3A8MPY1 467 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 POLR1CO15160 346 aaPredicted RBP3.75□□□□□ -1.81
SKP1-213ENST00000524288 TRBC1P01850 177 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 MBP02144 154 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 BCHEP06276 602 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 RHOCP08134 193 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 HLA-EP13747 358 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 RAB4AP20338 218 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 PMCHP20382 165 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 CFL1P23528 166 aaKnown RBP3.75□□□□□ -1.81
SKP1-213ENST00000524288 MYL9P24844 172 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 CD52P31358 61 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 SPAM1P38567 509 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 RAB25P57735 213 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 VSX2P58304 361 aaPredicted RBP3.75□□□□□ -1.81
SKP1-213ENST00000524288 HERVK_113P61574 105 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 PPP3R1P63098 170 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 TPBGQ13641 420 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 HSD17B12Q53GQ0 312 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 SPIN4Q56A73 249 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 TSPO2Q5TGU0 170 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 SAXO2Q658L1 398 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 CD200R1LQ6Q8B3 271 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 NPSR1Q6W5P4 371 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 IDO2Q6ZQW0 420 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 TPGS1Q6ZTW0 290 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 DEFB128Q7Z7B8 93 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 APRG1Q8IVJ8 170 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 PRSS58Q8IYP2 241 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms