RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ZNF140P52738 457 aaPredicted RBP2.2□□□□□ -2.06
SKP1-212ENST00000523966 STC1P52823 247 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 MTPNP58546 118 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 DNAJB13P59910 316 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 PPP1CAP62136 330 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 PAFAH1B2P68402 229 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 RPL18AQ02543 176 aaKnown RBP2.2□□□□□ -2.06
SKP1-212ENST00000523966 DMTNQ08495 405 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 STX3Q13277 289 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 HNRNPA1L2Q32P51 320 aaKnown RBP2.2□□□□□ -2.06
SKP1-212ENST00000523966 CDKL4Q5MAI5 379 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 LCE3AQ5TA76 89 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 N4BP2L1Q5TBK1 243 aaPredicted RBP2.2□□□□□ -2.06
SKP1-212ENST00000523966 FAM45BPQ6NSW5 357 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 C22orf39Q6P5X5 142 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 CCDC121Q6ZUS5 278 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 OR2W3Q7Z3T1 314 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 CRLF3Q8IUI8 442 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 DRAM1Q8N682 238 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 OR4K2Q8NGD2 314 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 STAG3L4Q8TBR4 150 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 FAM45AQ8TCE6 357 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 SFXN5Q8TD22 340 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 PDCD6IPQ8WUM4 868 aaKnown RBP2.2□□□□□ -2.06
SKP1-212ENST00000523966 OR8D1Q8WZ84 308 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 ZNF75CPQ92670 426 aaPredicted RBP2.2□□□□□ -2.06
SKP1-212ENST00000523966 MRPL48Q96GC5 212 aaKnown RBP2.2□□□□□ -2.06
SKP1-212ENST00000523966 DCUN1D1Q96GG9 259 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 KCNS1Q96KK3 526 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 MARVELD1Q9BSK0 173 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 KRTAP4-3Q9BYR4 195 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 TM6SF2Q9BZW4 377 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 POPDC3Q9HBV1 291 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 FBXO8Q9NRD0 319 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 FGFR1OP2Q9NVK5 253 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 FLVCR2Q9UPI3 526 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 CCL26Q9Y258 94 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 PPIL1Q9Y3C6 166 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 ARL5AQ9Y689 179 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 ANKRD36A6QL64 1941 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 TRPM6Q9BX84 2022 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 ARID1AO14497 2285 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 SEC16AO15027 2179 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 ALPK3Q96L96 1907 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 A0A0A6YYD5 115 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 ERICH4A6NGS2 130 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 TRPC5OSA6NMA1 111 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 A8MWL6 223 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 TMEM114B3SHH9 223 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 E5RI56 91 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 K7ERQ8 282 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 PSMD11O00231 422 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 CCDC22O60826 627 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 EDF1O60869 148 aaKnown RBP2.19□□□□□ -2.06
SKP1-212ENST00000523966 SMIM24O75264 130 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 TRBV12-3P01733 135 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 MAS1P04201 325 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 APODP05090 189 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 SLC35E2BP0CK96 405 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 THRAP10827 490 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 RPS3P23396 243 aaKnown RBP eCLIP2.19□□□□□ -2.062e-11■■□□□ 12.7
SKP1-212ENST00000523966 SPAM1P38567 509 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 SPINT3P49223 89 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 TAS2R43P59537 309 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 KRTAP10-8P60410 259 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 ST3GAL4Q11206 333 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 BTN1A1Q13410 526 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 MAPRE2Q15555 327 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 C6orf99Q4VX62 202 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 KLHL12Q53G59 568 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 PRR9Q5T870 116 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 PTRHD1Q6GMV3 140 aaKnown RBP2.19□□□□□ -2.06
SKP1-212ENST00000523966 SLC35D2Q76EJ3 337 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 LRRC34Q8IZ02 419 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 SLC7A5P1Q8MH63 180 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 ST20-AS1Q8NBB2 130 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 OR2Z1Q8NG97 314 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 OR13C4Q8NGS5 318 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 WFDC5Q8TCV5 224 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 MSANTD3Q96H12 275 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 ZNF514Q96K75 400 aaPredicted RBP2.19□□□□□ -2.06
SKP1-212ENST00000523966 IP6K3Q96PC2 410 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 KLF6Q99612 283 aaPredicted RBP2.19□□□□□ -2.06
SKP1-212ENST00000523966 CTRCQ99895 268 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 DERL2Q9GZP9 239 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 ZNF442Q9H7R0 627 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 SAR1AQ9NR31 198 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 HEBP1Q9NRV9 189 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 MARCOQ9UEW3 520 aaPredicted RBP2.19□□□□□ -2.06
SKP1-212ENST00000523966 SCML1Q9UN30 329 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 STK38LQ9Y2H1 464 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 SIGLEC9Q9Y336 463 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 OR51B2Q9Y5P1 312 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 USH1CQ9Y6N9 552 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 PLXNA4Q9HCM2 1894 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 NYNRINQ9P2P1 1898 aaKnown RBP2.19□□□□□ -2.06
SKP1-212ENST00000523966 SDK1Q7Z5N4 2213 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 ATG2BQ96BY7 2078 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 KIAA1671Q9BY89 1806 aa2.19□□□□□ -2.06
SKP1-212ENST00000523966 PTPRSQ13332 1948 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms