RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 FAM53AQ6NSI3 398 aaPredicted RBP16.47■□□□□ 0.23
SDCBP-209ENST00000522243 AHSA2Q719I0 299 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 JAGN1Q8N5M9 183 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 PCDHB16Q9NRJ7 776 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 CKLFQ9UBR5 152 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 MOB4Q9Y3A3 225 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 HSPE1-MOB4S4R3N1 261 aa16.47■□□□□ 0.23
SDCBP-209ENST00000522243 TRBV5-7A0A0A0MS05 114 aa16.46■□□□□ 0.23
SDCBP-209ENST00000522243 ZNF780AO75290 641 aaPredicted RBP16.46■□□□□ 0.23
SDCBP-209ENST00000522243 MAS1P04201 325 aa16.46■□□□□ 0.23
SDCBP-209ENST00000522243 PF4V1P10720 104 aa16.46■□□□□ 0.23
SDCBP-209ENST00000522243 GTF2F2P13984 249 aa16.46■□□□□ 0.23
SDCBP-209ENST00000522243 CAPGP40121 348 aa16.46■□□□□ 0.23
SDCBP-209ENST00000522243 DOC2BQ14184 412 aa16.46■□□□□ 0.23
SDCBP-209ENST00000522243 GLIPR1L1Q6UWM5 242 aa16.46■□□□□ 0.23
SDCBP-209ENST00000522243 LINC00596Q86U02 117 aa16.46■□□□□ 0.23
SDCBP-209ENST00000522243 THNSL2Q86YJ6 484 aa16.46■□□□□ 0.23
SDCBP-209ENST00000522243 C8orf59Q8N0T1 100 aaPredicted RBP16.46■□□□□ 0.23
SDCBP-209ENST00000522243 OR10A7Q8NGE5 316 aa16.46■□□□□ 0.23
SDCBP-209ENST00000522243 OR10X1Q8NGY0 326 aa16.46■□□□□ 0.23
SDCBP-209ENST00000522243 MYDGFQ969H8 173 aa16.46■□□□□ 0.23
SDCBP-209ENST00000522243 ARL11Q969Q4 196 aa16.46■□□□□ 0.23
SDCBP-209ENST00000522243 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.46■□□□□ 0.23
SDCBP-209ENST00000522243 MRPS28Q9Y2Q9 187 aaKnown RBP16.46■□□□□ 0.23
SDCBP-209ENST00000522243 IGHV3-43A0A0B4J1X8 118 aa16.45■□□□□ 0.22
SDCBP-209ENST00000522243 EFCAB10A6NFE3 127 aa16.45■□□□□ 0.22
SDCBP-209ENST00000522243 C15orf65H3BRN8 121 aa16.45■□□□□ 0.22
SDCBP-209ENST00000522243 M0QZK8 103 aa16.45■□□□□ 0.22
SDCBP-209ENST00000522243 IGHV3-43DP0DP04 118 aa16.45■□□□□ 0.22
SDCBP-209ENST00000522243 TMEM11P17152 192 aa16.45■□□□□ 0.22
SDCBP-209ENST00000522243 FSTP19883 344 aa16.45■□□□□ 0.22
SDCBP-209ENST00000522243 GZMHP20718 246 aa16.45■□□□□ 0.22
SDCBP-209ENST00000522243 RAB7AP51149 207 aa16.45■□□□□ 0.22
SDCBP-209ENST00000522243 KHDC1LQ5JSQ8 128 aa16.45■□□□□ 0.22
SDCBP-209ENST00000522243 STX19Q8N4C7 294 aa16.45■□□□□ 0.22
SDCBP-209ENST00000522243 BPIFB6Q8NFQ5 453 aa16.45■□□□□ 0.22
SDCBP-209ENST00000522243 OR4X2Q8NGF9 303 aa16.45■□□□□ 0.22
SDCBP-209ENST00000522243 PSORS1C1Q9UIG5 152 aa16.45■□□□□ 0.22
SDCBP-209ENST00000522243 SDCBPO00560 298 aaPredicted RBP16.44■□□□□ 0.22
SDCBP-209ENST00000522243 MYL12BO14950 172 aa16.44■□□□□ 0.22
SDCBP-209ENST00000522243 IGKV1D-33P01593 117 aa16.44■□□□□ 0.22
SDCBP-209ENST00000522243 IGKV1-33P01594 117 aa16.44■□□□□ 0.22
SDCBP-209ENST00000522243 MT-ND4P03905 459 aa16.44■□□□□ 0.22
SDCBP-209ENST00000522243 CELP19835 753 aa16.44■□□□□ 0.22
SDCBP-209ENST00000522243 CD33P20138 364 aa16.44■□□□□ 0.22
SDCBP-209ENST00000522243 REG1BP48304 166 aa16.44■□□□□ 0.22
SDCBP-209ENST00000522243 TAS2R43P59537 309 aa16.44■□□□□ 0.22
SDCBP-209ENST00000522243 GPR176Q14439 515 aa16.44■□□□□ 0.22
SDCBP-209ENST00000522243 AWAT2Q6E213 333 aa16.44■□□□□ 0.22
SDCBP-209ENST00000522243 SLC16A12Q6ZSM3 486 aa16.44■□□□□ 0.22
SDCBP-209ENST00000522243 BANF2Q9H503 90 aa16.44■□□□□ 0.22
SDCBP-209ENST00000522243 CNOT2Q9NZN8 540 aaKnown RBP16.44■□□□□ 0.22
SDCBP-209ENST00000522243 TSSC4Q9Y5U2 329 aaPredicted RBP16.44■□□□□ 0.22
SDCBP-209ENST00000522243 IGHV3-72A0A0B4J1Y9 119 aa16.43■□□□□ 0.22
SDCBP-209ENST00000522243 ANKRD65E5RJM6 399 aa16.43■□□□□ 0.22
SDCBP-209ENST00000522243 AIPO00170 330 aa16.43■□□□□ 0.22
SDCBP-209ENST00000522243 HSD17B6O14756 317 aa16.43■□□□□ 0.22
SDCBP-209ENST00000522243 PIN1P1O15428 100 aa16.43■□□□□ 0.22
SDCBP-209ENST00000522243 WNT4P56705 351 aa16.43■□□□□ 0.22
SDCBP-209ENST00000522243 OGFRL1Q5TC84 451 aaPredicted RBP16.43■□□□□ 0.22
SDCBP-209ENST00000522243 MOB3BQ86TA1 216 aa16.43■□□□□ 0.22
SDCBP-209ENST00000522243 OR8H3Q8N146 312 aa16.43■□□□□ 0.22
SDCBP-209ENST00000522243 SGCDQ92629 289 aa16.43■□□□□ 0.22
SDCBP-209ENST00000522243 CYYR1Q96J86 154 aa16.43■□□□□ 0.22
SDCBP-209ENST00000522243 DERL3Q96Q80 235 aa16.43■□□□□ 0.22
SDCBP-209ENST00000522243 MCRIP1C9JLW8 97 aa16.42■□□□□ 0.22
SDCBP-209ENST00000522243 IGLL1P15814 213 aa16.42■□□□□ 0.22
SDCBP-209ENST00000522243 VHLP40337 213 aa16.42■□□□□ 0.22
SDCBP-209ENST00000522243 ZNF497Q6ZNH5 498 aa16.42■□□□□ 0.22
SDCBP-209ENST00000522243 ZNF329Q86UD4 541 aa16.42■□□□□ 0.22
SDCBP-209ENST00000522243 C5orf56Q8N8D9 126 aa16.42■□□□□ 0.22
SDCBP-209ENST00000522243 OR4K15Q8NH41 348 aa16.42■□□□□ 0.22
SDCBP-209ENST00000522243 PHF21AQ96BD5 680 aa16.42■□□□□ 0.22
SDCBP-209ENST00000522243 PLCXD1Q9NUJ7 323 aa16.42■□□□□ 0.22
SDCBP-209ENST00000522243 GFOD1Q9NXC2 390 aa16.42■□□□□ 0.22
SDCBP-209ENST00000522243 TRAPPC2LQ9UL33 140 aa16.42■□□□□ 0.22
SDCBP-209ENST00000522243 IGHV1-3A0A0C4DH29 117 aa16.41■□□□□ 0.22
SDCBP-209ENST00000522243 PSMB11A5LHX3 300 aa16.41■□□□□ 0.22
SDCBP-209ENST00000522243 CCRL2O00421 344 aa16.41■□□□□ 0.22
SDCBP-209ENST00000522243 CASQ2O14958 399 aaPredicted RBP16.41■□□□□ 0.22
SDCBP-209ENST00000522243 ORC5O43913 435 aa16.41■□□□□ 0.22
SDCBP-209ENST00000522243 PF4P02776 101 aa16.41■□□□□ 0.22
SDCBP-209ENST00000522243 GAPDHP04406 335 aaKnown RBP16.41■□□□□ 0.22
SDCBP-209ENST00000522243 LOXL3P58215 753 aa16.41■□□□□ 0.22
SDCBP-209ENST00000522243 ZNF816Q0VGE8 651 aaPredicted RBP16.41■□□□□ 0.22
SDCBP-209ENST00000522243 SYT6Q5T7P8 510 aaPredicted RBP16.41■□□□□ 0.22
SDCBP-209ENST00000522243 RAB12Q6IQ22 244 aa16.41■□□□□ 0.22
SDCBP-209ENST00000522243 NANOGP1Q8N7R0 232 aa16.41■□□□□ 0.22
SDCBP-209ENST00000522243 OR52M1Q8NGK5 317 aa16.41■□□□□ 0.22
SDCBP-209ENST00000522243 FBLIM1Q8WUP2 373 aa16.41■□□□□ 0.22
SDCBP-209ENST00000522243 NOL4LQ96MY1 436 aaPredicted RBP16.41■□□□□ 0.22
SDCBP-209ENST00000522243 SELENOIQ9C0D9 397 aa16.41■□□□□ 0.22
SDCBP-209ENST00000522243 ETAA1Q9NY74 926 aa16.41■□□□□ 0.22
SDCBP-209ENST00000522243 RCC2Q9P258 522 aaKnown RBP16.41■□□□□ 0.22
SDCBP-209ENST00000522243 LINC00527Q9UJ94 153 aa16.41■□□□□ 0.22
SDCBP-209ENST00000522243 SLC31A2O15432 143 aa16.4■□□□□ 0.22
SDCBP-209ENST00000522243 CRTAPO75718 401 aaPredicted RBP16.4■□□□□ 0.22
SDCBP-209ENST00000522243 MGMTP16455 207 aa16.4■□□□□ 0.22
SDCBP-209ENST00000522243 INSL4Q14641 139 aa16.4■□□□□ 0.22
SDCBP-209ENST00000522243 Q6ZPA2 131 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms