RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 RUNX1Q01196 453 aa12.78□□□□□ -0.36
TRAM1-204ENST00000521049 KIAA0141Q14154 515 aaPredicted RBP12.78□□□□□ -0.36
TRAM1-204ENST00000521049 IL13RA2Q14627 380 aa12.78□□□□□ -0.36
TRAM1-204ENST00000521049 SERPINA12Q8IW75 414 aa12.78□□□□□ -0.36
TRAM1-204ENST00000521049 OR5D14Q8NGL3 314 aa12.78□□□□□ -0.36
TRAM1-204ENST00000521049 OR10AC1Q8NH08 325 aa12.78□□□□□ -0.36
TRAM1-204ENST00000521049 PLPPR1Q8TBJ4 325 aa12.78□□□□□ -0.36
TRAM1-204ENST00000521049 ST6GALNAC6Q969X2 333 aa12.78□□□□□ -0.36
TRAM1-204ENST00000521049 EME1Q96AY2 570 aa12.78□□□□□ -0.36
TRAM1-204ENST00000521049 KCTD7Q96MP8 289 aa12.78□□□□□ -0.36
TRAM1-204ENST00000521049 CITED4Q96RK1 184 aa12.78□□□□□ -0.36
TRAM1-204ENST00000521049 HSPB9Q9BQS6 159 aa12.78□□□□□ -0.36
TRAM1-204ENST00000521049 GAR1Q9NY12 217 aaKnown RBP12.78□□□□□ -0.36
TRAM1-204ENST00000521049 OR4C45A6NMZ5 311 aa12.77□□□□□ -0.37
TRAM1-204ENST00000521049 I3L521 148 aa12.77□□□□□ -0.37
TRAM1-204ENST00000521049 HCKP08631 526 aa12.77□□□□□ -0.37
TRAM1-204ENST00000521049 RPSAP08865 295 aaKnown RBP12.77□□□□□ -0.37
TRAM1-204ENST00000521049 ZNF616Q08AN1 781 aa12.77□□□□□ -0.37
TRAM1-204ENST00000521049 ZNF691Q5VV52 312 aa12.77□□□□□ -0.37
TRAM1-204ENST00000521049 OVCH2Q7RTZ1 564 aa12.77□□□□□ -0.37
TRAM1-204ENST00000521049 FAM71E2Q8N5Q1 922 aa12.77□□□□□ -0.37
TRAM1-204ENST00000521049 ZNF491Q8N8L2 437 aa12.77□□□□□ -0.37
TRAM1-204ENST00000521049 RTN4IP1Q8WWV3 396 aaPredicted RBP12.77□□□□□ -0.37
TRAM1-204ENST00000521049 RNFT2Q96EX2 444 aa12.77□□□□□ -0.37
TRAM1-204ENST00000521049 TRAV39A0A0B4J263 110 aa12.76□□□□□ -0.37
TRAM1-204ENST00000521049 SLC16A6O15403 523 aa12.76□□□□□ -0.37
TRAM1-204ENST00000521049 SULT1B1O43704 296 aa12.76□□□□□ -0.37
TRAM1-204ENST00000521049 FRMD6-AS1P0C7T7 363 aa12.76□□□□□ -0.37
TRAM1-204ENST00000521049 IL3RAP26951 378 aa12.76□□□□□ -0.37
TRAM1-204ENST00000521049 POLR2IP36954 125 aaKnown RBP12.76□□□□□ -0.37
TRAM1-204ENST00000521049 F2RL1P55085 397 aa12.76□□□□□ -0.37
TRAM1-204ENST00000521049 Q3ZCU0 254 aa12.76□□□□□ -0.37
TRAM1-204ENST00000521049 ASPHD1Q5U4P2 390 aa12.76□□□□□ -0.37
TRAM1-204ENST00000521049 TMEM65Q6PI78 240 aa12.76□□□□□ -0.37
TRAM1-204ENST00000521049 ZDHHC13Q8IUH4 622 aa12.76□□□□□ -0.37
TRAM1-204ENST00000521049 PARP16Q8N5Y8 322 aa12.76□□□□□ -0.37
TRAM1-204ENST00000521049 GABARAPL1Q9H0R8 117 aa12.76□□□□□ -0.37
TRAM1-204ENST00000521049 POMPQ9Y244 141 aa12.76□□□□□ -0.37
TRAM1-204ENST00000521049 VSIG4Q9Y279 399 aa12.76□□□□□ -0.37
TRAM1-204ENST00000521049 DAPL1A0PJW8 107 aa12.75□□□□□ -0.37
TRAM1-204ENST00000521049 ZNF736B4DX44 427 aaPredicted RBP12.75□□□□□ -0.37
TRAM1-204ENST00000521049 C15orf65H3BRN8 121 aa12.75□□□□□ -0.37
TRAM1-204ENST00000521049 J3QRE1 110 aa12.75□□□□□ -0.37
TRAM1-204ENST00000521049 PPIFP30405 207 aaKnown RBP12.75□□□□□ -0.37
TRAM1-204ENST00000521049 ALKBH1Q13686 389 aaKnown RBP12.75□□□□□ -0.37
TRAM1-204ENST00000521049 GALEQ14376 348 aa12.75□□□□□ -0.37
TRAM1-204ENST00000521049 ATP6AP1Q15904 470 aa12.75□□□□□ -0.37
TRAM1-204ENST00000521049 CPNE2Q96FN4 548 aaPredicted RBP12.75□□□□□ -0.37
TRAM1-204ENST00000521049 DPCDQ9BVM2 203 aaPredicted RBP12.75□□□□□ -0.37
TRAM1-204ENST00000521049 KLK15Q9H2R5 256 aa12.75□□□□□ -0.37
TRAM1-204ENST00000521049 RIBC2Q9H4K1 309 aa12.75□□□□□ -0.37
TRAM1-204ENST00000521049 IFT22Q9H7X7 185 aa12.75□□□□□ -0.37
TRAM1-204ENST00000521049 SDCBPO00560 298 aaPredicted RBP12.74□□□□□ -0.37
TRAM1-204ENST00000521049 OVOL1O14753 267 aa12.74□□□□□ -0.37
TRAM1-204ENST00000521049 TXNL1O43396 289 aa12.74□□□□□ -0.37
TRAM1-204ENST00000521049 ORC5O43913 435 aa12.74□□□□□ -0.37
TRAM1-204ENST00000521049 ZSCAN26Q16670 478 aa12.74□□□□□ -0.37
TRAM1-204ENST00000521049 ASCL4Q6XD76 172 aa12.74□□□□□ -0.37
TRAM1-204ENST00000521049 SUMF2Q8NBJ7 301 aa12.74□□□□□ -0.37
TRAM1-204ENST00000521049 TRUB1Q8WWH5 349 aaKnown RBP12.74□□□□□ -0.37
TRAM1-204ENST00000521049 DCUN1D4Q92564 292 aa12.74□□□□□ -0.37
TRAM1-204ENST00000521049 ARL11Q969Q4 196 aa12.74□□□□□ -0.37
TRAM1-204ENST00000521049 PELI1Q96FA3 418 aa12.74□□□□□ -0.37
TRAM1-204ENST00000521049 CIB1Q99828 191 aa12.74□□□□□ -0.37
TRAM1-204ENST00000521049 GNB4Q9HAV0 340 aa12.74□□□□□ -0.37
TRAM1-204ENST00000521049 GFOD1Q9NXC2 390 aa12.74□□□□□ -0.37
TRAM1-204ENST00000521049 ZNF107Q9UII5 783 aaPredicted RBP12.74□□□□□ -0.37
TRAM1-204ENST00000521049 TMEM30CPA0ZSE6 113 aa12.73□□□□□ -0.37
TRAM1-204ENST00000521049 J3QLW9 94 aa12.73□□□□□ -0.37
TRAM1-204ENST00000521049 GYG2O15488 501 aa12.73□□□□□ -0.37
TRAM1-204ENST00000521049 IGLV1-40P01703 118 aa12.73□□□□□ -0.37
TRAM1-204ENST00000521049 GP9P14770 177 aa12.73□□□□□ -0.37
TRAM1-204ENST00000521049 SPNP16150 400 aa12.73□□□□□ -0.37
TRAM1-204ENST00000521049 ZNF19P17023 458 aa12.73□□□□□ -0.37
TRAM1-204ENST00000521049 VHLP40337 213 aa12.73□□□□□ -0.37
TRAM1-204ENST00000521049 ZNF137PP52743 207 aa12.73□□□□□ -0.37
TRAM1-204ENST00000521049 RSU1Q15404 277 aa12.73□□□□□ -0.37
TRAM1-204ENST00000521049 PIGYQ3MUY2 71 aa12.73□□□□□ -0.37
TRAM1-204ENST00000521049 DNAL1Q4LDG9 190 aa12.73□□□□□ -0.37
TRAM1-204ENST00000521049 ZFAND6Q6FIF0 208 aa12.73□□□□□ -0.37
TRAM1-204ENST00000521049 TNFAIP8L1Q8WVP5 186 aa12.73□□□□□ -0.37
TRAM1-204ENST00000521049 GABARAPL3Q9BY60 117 aa12.73□□□□□ -0.37
TRAM1-204ENST00000521049 ISYNA1Q9NPH2 558 aa12.73□□□□□ -0.37
TRAM1-204ENST00000521049 FAM90A10PA6NDY2 464 aa12.72□□□□□ -0.37
TRAM1-204ENST00000521049 GABRPO00591 440 aa12.72□□□□□ -0.37
TRAM1-204ENST00000521049 MAGEB3O15480 346 aa12.72□□□□□ -0.37
TRAM1-204ENST00000521049 SAP30O75446 220 aa12.72□□□□□ -0.37
TRAM1-204ENST00000521049 RAB9AP51151 201 aa12.72□□□□□ -0.37
TRAM1-204ENST00000521049 GNB1P62873 340 aa12.72□□□□□ -0.37
TRAM1-204ENST00000521049 NHLRC3Q5JS37 347 aa12.72□□□□□ -0.37
TRAM1-204ENST00000521049 SLC25A30Q5SVS4 291 aa12.72□□□□□ -0.37
TRAM1-204ENST00000521049 SLC25A48Q6ZT89 311 aaKnown RBP12.72□□□□□ -0.37
TRAM1-204ENST00000521049 ACBD7Q8N6N7 88 aa12.72□□□□□ -0.37
TRAM1-204ENST00000521049 OR10K1Q8NGX5 313 aa12.72□□□□□ -0.37
TRAM1-204ENST00000521049 GPER1Q99527 375 aa12.72□□□□□ -0.37
TRAM1-204ENST00000521049 TM2D3Q9BRN9 247 aa12.72□□□□□ -0.37
TRAM1-204ENST00000521049 OR51J1Q9H342 316 aa12.72□□□□□ -0.37
TRAM1-204ENST00000521049 GHITMQ9H3K2 345 aa12.72□□□□□ -0.37
TRAM1-204ENST00000521049 ST3GAL6Q9Y274 331 aa12.72□□□□□ -0.37
TRAM1-204ENST00000521049 HTR3BO95264 441 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms