RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 CUL9Q8IWT3 2517 aa8.7□□□□□ -1.02
MCF2-209ENST00000520602 LILRA1O75019 489 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 OR2H2O95918 312 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 VDAC1P21796 283 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 ELLP55199 621 aaPredicted RBP8.69□□□□□ -1.02
MCF2-209ENST00000520602 TMEM267Q0VDI3 215 aaPredicted RBP8.69□□□□□ -1.02
MCF2-209ENST00000520602 NRN1LQ496H8 165 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 CXorf66Q5JRM2 361 aaPredicted RBP8.69□□□□□ -1.02
MCF2-209ENST00000520602 FAM209AQ5JX71 171 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 BHLHA15Q7RTS1 189 aaPredicted RBP8.69□□□□□ -1.02
MCF2-209ENST00000520602 STPG2Q8N412 459 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 KLF14Q8TD94 323 aaPredicted RBP8.69□□□□□ -1.02
MCF2-209ENST00000520602 HPSE2Q8WWQ2 592 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 AKR1E2Q96JD6 320 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 LPAR3Q9UBY5 353 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 ATP23Q9Y6H3 246 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 VCANP13611 3396 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 RNASEK-C17orf49H0YIS7 233 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 F12P00748 615 aaPredicted RBP8.69□□□□□ -1.02
MCF2-209ENST00000520602 H2AFB1P0C5Y9 115 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 IGHV1-2P23083 117 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 HLA-DRB3P79483 266 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 DTX1Q86Y01 620 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 AIFM2Q9BRQ8 373 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 OR2D2Q9H210 308 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 LIN7CQ9NUP9 197 aaKnown RBP8.69□□□□□ -1.02
MCF2-209ENST00000520602 ATPIF1Q9UII2 106 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 PQLC2LA1A4F0 135 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 C1QL1O75973 258 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 HKR1P10072 659 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 PSG2P11465 335 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 HBG1P69891 147 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 HBG2P69892 147 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 TAGLNQ01995 201 aaKnown RBP8.69□□□□□ -1.02
MCF2-209ENST00000520602 SOHLH1Q5JUK2 328 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 BTNL3Q6UXE8 466 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 ZNF818PQ6ZRF7 136 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 H2BFWTQ7Z2G1 175 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 LHFPL1Q86WI0 220 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 MRGPRFQ96AM1 343 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 PSG11Q9UQ72 335 aa8.69□□□□□ -1.02
MCF2-209ENST00000520602 PRR33A8MZF0 331 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 DEDDO75618 318 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 CRYABP02511 175 aaKnown RBP8.68□□□□□ -1.02
MCF2-209ENST00000520602 NDUFB7P17568 137 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 PTAFRP25105 342 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 MPZP25189 248 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 IL13RA2Q14627 380 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 TMEM187Q14656 261 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 PLA2G2CQ5R387 149 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 MDS2Q8NDY4 140 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 SDSLQ96GA7 329 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 CXXC4Q9H2H0 198 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 PSENENQ9NZ42 101 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 OR1A1Q9P1Q5 309 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 TMEM218A2RU14 115 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 WNT9BO14905 357 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 SHOXO15266 292 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 RRP8O43159 456 aaKnown RBP8.68□□□□□ -1.02
MCF2-209ENST00000520602 IL18BPO95998 194 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 METTL15P1P0C7V9 234 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 WNT5AP41221 380 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 LPAR6P43657 344 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 ID4P47928 161 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 LCN15Q6UWW0 184 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 LYPD6Q86Y78 171 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 OR5T1Q8NG75 326 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 HS3ST6Q96QI5 342 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 DYNLRB1Q9NP97 96 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 MMP26Q9NRE1 261 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 MUC6Q6W4X9 2439 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 S100A9P06702 114 aaKnown RBP8.68□□□□□ -1.02
MCF2-209ENST00000520602 HLA-GP17693 338 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 GPR12P47775 334 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 ZNF154Q13106 437 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 MOB1BQ7L9L4 216 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 CISD2Q8N5K1 135 aaKnown RBP8.68□□□□□ -1.02
MCF2-209ENST00000520602 RBMXL1Q96E39 390 aaKnown RBP8.68□□□□□ -1.02
MCF2-209ENST00000520602 TMEM222Q9H0R3 208 aa8.68□□□□□ -1.02
MCF2-209ENST00000520602 ZNF503-AS2A6NEH8 195 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 ZFP92A6NM28 416 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 H0YL77 283 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 DFFBO76075 338 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 IFNA10P01566 189 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 ZNF14P17017 642 aaPredicted RBP8.67□□□□□ -1.02
MCF2-209ENST00000520602 RPL35P42766 123 aaKnown RBP8.67□□□□□ -1.02
MCF2-209ENST00000520602 CASP6P55212 293 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 PSG7Q13046 419 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 SPINK9Q5DT21 86 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 DHRS11Q6UWP2 260 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 Q6ZT83 130 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 C9orf106Q8NAJ2 232 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 OR4A4PQ8NGN8 299 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 ERGIC1Q969X5 290 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 AQP10Q96PS8 301 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 PURGQ9UJV8 347 aaKnown RBP8.67□□□□□ -1.02
MCF2-209ENST00000520602 IGHV3OR15-7A0A075B7D8 119 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 CDRT15L2A8MXV6 281 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 SFTA3P0C7M3 94 aa8.67□□□□□ -1.02
MCF2-209ENST00000520602 EWSR1Q01844 656 aaKnown RBP eCLIP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms