RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-223	ENST00000520520	TMEM38B	Q9NVV0	291 aa		7.43	□□□□□ -1.22
CTNNA1-223	ENST00000520520	RCL1	Q9Y2P8	373 aa	Known RBP	7.43	□□□□□ -1.22
CTNNA1-223	ENST00000520520	PDZD2	O15018	2839 aa		7.43	□□□□□ -1.22
CTNNA1-223	ENST00000520520	MYO7B	Q6PIF6	2116 aa		7.43	□□□□□ -1.22
CTNNA1-223	ENST00000520520	IGHV1-45	A0A0A0MS14	117 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	MEX3A	A1L020	520 aa	Known RBP	7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	C7orf77	A4D0Y5	90 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	TRDC	B7Z8K6	153 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	C19orf84	I3L1E1	186 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	LINC01387	J3KSC0	135 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	WRB	O00258	174 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	SYNGR3	O43761	229 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	NME2P1	O60361	137 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	RAMP1	O60894	148 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	DFFB	O76075	338 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	CRYAB	P02511	175 aa	Known RBP	7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	OPN1LW	P04000	364 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	TK1	P04183	234 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520		P04436	131 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	SNRNP70	P08621	437 aa	Known RBP	7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	RAB5A	P20339	215 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	AGA	P20933	346 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	FUT3	P21217	361 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	NKX2-1	P43699	371 aa	Predicted RBP	7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	RBM11	P57052	281 aa	Known RBP	7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	KRTAP10-9	P60411	292 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	EWSR1	Q01844	656 aa	Known RBP eCLIP	7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	TLE4	Q04727	773 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	RBPJ	Q06330	500 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	HABP2	Q14520	560 aa	Predicted RBP	7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	C3AR1	Q16581	482 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	TAF9	Q16594	264 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	MPV17L	Q2QL34	196 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	KRTAP27-1	Q3LI81	207 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	PHLDA2	Q53GA4	152 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	AKIRIN2	Q53H80	203 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	SOHLH1	Q5JUK2	328 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	ABHD17B	Q5VST6	288 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	ZNF324B	Q6AW86	544 aa	Predicted RBP	7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	AAED1	Q7RTV5	226 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	RNF144B	Q7Z419	303 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	C1QL4	Q86Z23	238 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	ZNF695	Q8IW36	515 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	CMTM1	Q8IZ96	169 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	ZNF808	Q8N4W9	903 aa	Predicted RBP	7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	OR2C3	Q8N628	320 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	FAM213B	Q8TBF2	198 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	CD300LF	Q8TDQ1	290 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	SECTM1	Q8WVN6	248 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	PSMF1	Q92530	271 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	BOD1	Q96IK1	185 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	CLCC1	Q96S66	551 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	FAAP24	Q9BTP7	215 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	PAPOLG	Q9BWT3	736 aa	Known RBP	7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	RIMS4	Q9H426	269 aa	Predicted RBP	7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	ST3GAL6	Q9Y274	331 aa		7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	UBE2J1	Q9Y385	318 aa	Predicted RBP	7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	ANKRD17	O75179	2603 aa	Known RBP	7.42	□□□□□ -1.22
CTNNA1-223	ENST00000520520	PHF3	Q92576	2039 aa	Known RBP	7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	TACC2	O95359	2948 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	IGKV1D-8	A0A087WSZ0	117 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	C3orf85	A0A1B0GTC6	90 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	hCG_38984	A0A1B0GV85	526 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	C5orf52	A6NGY3	159 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	RPL36A-HNRNPH2	H7BZ11	118 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520		K7N7A8	449 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	PPY	P01298	95 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	SERPINA7	P05543	415 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	S100P	P25815	95 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	CA7	P43166	264 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	SULT1A1	P50225	295 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	ADORA2A-AS1	P86434	159 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	CDSN	Q15517	529 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	SNAI3	Q3KNW1	292 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	ZNF766	Q5HY98	468 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	KRBOX4	Q5JUW0	171 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	AKR1C8P	Q5T2L2	129 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	ABLIM2	Q6H8Q1	611 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	CRIP3	Q6Q6R5	217 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	TMEM182	Q6ZP80	229 aa	Predicted RBP	7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	STX12	Q86Y82	276 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	ZFP82	Q8N141	532 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	FBXL14	Q8N1E6	418 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	OR10AD1	Q8NGE0	317 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	OR4D5	Q8NGN0	318 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	OR2V1	Q8NHB1	315 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	LILRB1	Q8NHL6	650 aa	Predicted RBP	7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	C2CD4C	Q8TF44	421 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	ERGIC1	Q969X5	290 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	MSI2	Q96DH6	328 aa	Known RBP	7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	FBXO17	Q96EF6	278 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	JSRP1	Q96MG2	331 aa	Predicted RBP	7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	ZNF385A	Q96PM9	386 aa	Known RBP	7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	HDHD3	Q9BSH5	251 aa	Predicted RBP	7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	HES7	Q9BYE0	225 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	PRDM14	Q9GZV8	571 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	TMEM222	Q9H0R3	208 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	PLK3	Q9H4B4	646 aa		7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	ESRP2	Q9H6T0	727 aa	Known RBP	7.41	□□□□□ -1.22
CTNNA1-223	ENST00000520520	SIRT7	Q9NRC8	400 aa		7.41	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms