RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 PHF21AQ96BD5 680 aa12.86□□□□□ -0.35
IGHV3-42-201ENST00000520410 IL36GQ9NZH8 169 aa12.86□□□□□ -0.35
IGHV3-42-201ENST00000520410 TRAPPC2LQ9UL33 140 aa12.86□□□□□ -0.35
IGHV3-42-201ENST00000520410 WNK1Q9H4A3 2382 aa12.86□□□□□ -0.35
IGHV3-42-201ENST00000520410 MAGEA13PA6NCF6 341 aa12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 EFCAB10A6NFE3 127 aa12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 MCRIP1C9JLW8 97 aa12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 LY6LH3BQJ8 138 aa12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 TAS2R43P59537 309 aa12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 CD83Q01151 205 aa12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 GPR176Q14439 515 aa12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 OR8H3Q8N146 312 aa12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 BPIFB6Q8NFQ5 453 aa12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 OR10A7Q8NGE5 316 aa12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 WIPF2Q8TF74 440 aaPredicted RBP12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 GGHQ92820 318 aa12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 NCOR1P1Q9H4R4 102 aa12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 C8orf4Q9NR00 106 aa12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 NECAP2Q9NVZ3 263 aa12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 ETAA1Q9NY74 926 aa12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 LINC00527Q9UJ94 153 aa12.85□□□□□ -0.35
IGHV3-42-201ENST00000520410 TRAV8-7A0A075B6U6 113 aa12.84□□□□□ -0.35
IGHV3-42-201ENST00000520410 A0A1W2PPI3 338 aa12.84□□□□□ -0.35
IGHV3-42-201ENST00000520410 CRTAPO75718 401 aaPredicted RBP12.84□□□□□ -0.35
IGHV3-42-201ENST00000520410 GAPDHP04406 335 aaKnown RBP12.84□□□□□ -0.35
IGHV3-42-201ENST00000520410 GZMHP20718 246 aa12.84□□□□□ -0.35
IGHV3-42-201ENST00000520410 SLC35A2P78381 396 aa12.84□□□□□ -0.35
IGHV3-42-201ENST00000520410 DMKNQ6E0U4 476 aaPredicted RBP12.84□□□□□ -0.35
IGHV3-42-201ENST00000520410 ASCL4Q6XD76 172 aa12.84□□□□□ -0.35
IGHV3-42-201ENST00000520410 ZNF329Q86UD4 541 aa12.84□□□□□ -0.35
IGHV3-42-201ENST00000520410 PACRGLQ8N7B6 248 aa12.84□□□□□ -0.35
IGHV3-42-201ENST00000520410 OR4K15Q8NH41 348 aa12.84□□□□□ -0.35
IGHV3-42-201ENST00000520410 SELENOIQ9C0D9 397 aa12.84□□□□□ -0.35
IGHV3-42-201ENST00000520410 VCXQ9H320 206 aa12.84□□□□□ -0.35
IGHV3-42-201ENST00000520410 BANF2Q9H503 90 aa12.84□□□□□ -0.35
IGHV3-42-201ENST00000520410 GNG12Q9UBI6 72 aa12.84□□□□□ -0.35
IGHV3-42-201ENST00000520410 TRBV5-5A0A0J9YX44 114 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 NPIPB11E5RHQ5 1161 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 SPINT2O43291 252 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 AMY1AP04745 511 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 AMY2AP04746 511 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 CGB3P0DN86 165 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 CGB7P0DN87 165 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 CELP19835 753 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 CAPGP40121 348 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 SLC35B1P78383 322 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 TCTEX1D4Q5JR98 221 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 NHLRC3Q5JS37 347 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 KPRPQ5T749 579 aaPredicted RBP12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 RAB12Q6IQ22 244 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 SLC35E3Q7Z769 313 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 THNSL2Q86YJ6 484 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 FOXRED2Q8IWF2 684 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 OR10V1Q8NGI7 309 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 NOL4LQ96MY1 436 aaPredicted RBP12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 SPACA1Q9HBV2 294 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 RAB9BQ9NP90 201 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 AURKAIP1Q9NWT8 199 aaPredicted RBP12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 PEX16Q9Y5Y5 336 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 VWFP04275 2813 aa12.83□□□□□ -0.36
IGHV3-42-201ENST00000520410 KIAA2026Q5HYC2 2103 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 CMYA5Q8N3K9 4069 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 IGHV1-3A0A0C4DH29 117 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 UBE2QL1A1L167 161 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 MPIG6BO95866 241 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 IGFBP3P17936 291 aaPredicted RBP12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 FSTP19883 344 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 WNT4P56705 351 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 ADARB1P78563 741 aaKnown RBP12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 NKAPLQ5M9Q1 402 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 C6orf183Q5T699 404 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 SYT6Q5T7P8 510 aaPredicted RBP12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 FOXB2Q5VYV0 432 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 SLC16A12Q6ZSM3 486 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 C5orf56Q8N8D9 126 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 Q8NFD4 153 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 OR51D1Q8NGF3 324 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 CHPT1Q8WUD6 406 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 FAM46BQ96A09 425 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 PGLYRP3Q96LB9 341 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 IFT22Q9H7X7 185 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 GFOD1Q9NXC2 390 aa12.82□□□□□ -0.36
IGHV3-42-201ENST00000520410 GNAO1P09471 354 aa12.81□□□□□ -0.36
IGHV3-42-201ENST00000520410 MGMTP16455 207 aa12.81□□□□□ -0.36
IGHV3-42-201ENST00000520410 MAPK3P27361 379 aaPredicted RBP12.81□□□□□ -0.36
IGHV3-42-201ENST00000520410 RAB25P57735 213 aa12.81□□□□□ -0.36
IGHV3-42-201ENST00000520410 LOXL3P58215 753 aa12.81□□□□□ -0.36
IGHV3-42-201ENST00000520410 FAM53AQ6NSI3 398 aaPredicted RBP12.81□□□□□ -0.36
IGHV3-42-201ENST00000520410 ZNF497Q6ZNH5 498 aa12.81□□□□□ -0.36
IGHV3-42-201ENST00000520410 Q6ZPA2 131 aa12.81□□□□□ -0.36
IGHV3-42-201ENST00000520410 TFAP2CQ92754 450 aa12.81□□□□□ -0.36
IGHV3-42-201ENST00000520410 DPF1Q92782 380 aa12.81□□□□□ -0.36
IGHV3-42-201ENST00000520410 CNOT2Q9NZN8 540 aaKnown RBP12.81□□□□□ -0.36
IGHV3-42-201ENST00000520410 ERGIC3Q9Y282 383 aa12.81□□□□□ -0.36
IGHV3-42-201ENST00000520410 FAM90A18PA6NE21 464 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 FAM90A16PA6NEW6 464 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 FAM90A20PA6NIJ5 464 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 FAM90A9PA6NNJ1 464 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 FAM90A12PA8MX19 464 aa12.8□□□□□ -0.36
IGHV3-42-201ENST00000520410 FAM90A5PA8MXJ8 464 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms