RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 MYCBPQ99417 103 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-208ENST00000520228 TMEM246Q9BRR3 403 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 RTL8AQ9BWD3 113 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 RNPEPL1Q9HAU8 725 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 PATZ1Q9HBE1 687 aaKnown RBP5.59□□□□□ -1.51
SDCBP-208ENST00000520228 TMEM165Q9HC07 324 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 ACOXLQ9NUZ1 547 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 ENPP5Q9UJA9 477 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 SLC22A13Q9Y226 551 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 PIGLQ9Y2B2 252 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 MRPS28Q9Y2Q9 187 aaKnown RBP5.59□□□□□ -1.51
SDCBP-208ENST00000520228 ABCA1O95477 2261 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 TRAV38-1A0A0B4J264 116 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 A0A1B0GTI1 187 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 A0A1B0GVI7 797 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 TMEM210A6NLX4 147 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 CEACAM18A8MTB9 384 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 J3QLW9 94 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 LGALS8O00214 317 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 CDIPTO14735 213 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 SYT7O43581 403 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 WBP4O75554 376 aaKnown RBP5.58□□□□□ -1.52
SDCBP-208ENST00000520228 FOXH1O75593 365 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 DHRS3O75911 302 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 NRASP01111 189 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 WNT2P09544 360 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 RPS2P15880 293 aaKnown RBP5.58□□□□□ -1.52
SDCBP-208ENST00000520228 ZNF19P17023 458 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 SRP14P37108 136 aaKnown RBP5.58□□□□□ -1.52
SDCBP-208ENST00000520228 CAPGP40121 348 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 GPM6AP51674 278 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 CAPZA1P52907 286 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 OR12D2P58182 307 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 ACTA2P62736 377 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 GNG3P63215 75 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 ACTG2P63267 376 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 CSNK2BP67870 215 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 LCN2P80188 198 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 ZNF154Q13106 437 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 IL18R1Q13478 541 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 ZNF404Q494X3 552 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 ZFP69Q49AA0 526 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 CLVS2Q5SYC1 327 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 WDR86Q86TI4 376 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 LHFPL3Q86UP9 236 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 EGFL6Q8IUX8 553 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 C11orf53Q8IXP5 236 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 PRSS35Q8N3Z0 413 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 C19orf18Q8NEA5 215 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 OR5A2Q8NGI9 324 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 OR52I1Q8NGK6 324 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 OR2G2Q8NGZ5 317 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 CNIH3Q8TBE1 160 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 SETD6Q8TBK2 473 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 C4orf36Q96KX1 117 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 TLNRD1Q9H1K6 362 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 METTL17Q9H7H0 456 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-208ENST00000520228 INPP5EQ9NRR6 644 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 PLCXD1Q9NUJ7 323 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 MIOXQ9UGB7 285 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 V9GYS6 101 aa5.58□□□□□ -1.52
SDCBP-208ENST00000520228 ATRQ13535 2644 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 A0A0G2JMP0 313 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 A0A0X1KG70 313 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 IRGMA1A4Y4 181 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 OOEPA6NGQ2 149 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 A6NIN4 97 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 OR5B21A6NL26 309 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 DHRS7CA6NNS2 312 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 ZNF732B4DXR9 585 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 H0YAE9 185 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 H0YHG0 523 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 H3BSH0 61 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 J3QLI3 93 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 PHF1O43189 567 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-208ENST00000520228 NDUFA2O43678 99 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 PRAF2O60831 178 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 LHBP01229 141 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 HTR1AP08908 422 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 GNAO1P09471 354 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 UBCP0CG48 685 aaKnown RBP5.57□□□□□ -1.52
SDCBP-208ENST00000520228 CCL1P22362 96 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 DCKP27707 260 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 CD80P33681 288 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 CFHR2P36980 270 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 KIR3DL2P43630 455 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 PITPNBP48739 271 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 MICBQ29980 383 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 DMRTC1Q5HYR2 192 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 TMEM244Q5VVB8 128 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 PLCXD3Q63HM9 321 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 WDR82Q6UXN9 313 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 Q6ZSR3 168 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 RDH10Q8IZV5 341 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 C8orf59Q8N0T1 100 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-208ENST00000520228 SYS1Q8N2H4 156 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 CCDC54Q8NEL0 328 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 OR4M2Q8NGB6 313 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 OR8B3Q8NGG8 313 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 GATAD1Q8WUU5 269 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms