RNA–Protein interactions for RNA: ENST00000520199.5

CLK4-205, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-205ENST00000520199 THNSL2Q86YJ6 484 aa12.34□□□□□ -0.43
CLK4-205ENST00000520199 GAPTQ8N292 157 aa12.34□□□□□ -0.43
CLK4-205ENST00000520199 WFDC9Q8NEX5 89 aa12.34□□□□□ -0.43
CLK4-205ENST00000520199 CCDC107Q8WV48 283 aa12.34□□□□□ -0.43
CLK4-205ENST00000520199 STMN2Q93045 179 aa12.34□□□□□ -0.43
CLK4-205ENST00000520199 MYDGFQ969H8 173 aa12.34□□□□□ -0.43
CLK4-205ENST00000520199 MUL1Q969V5 352 aa12.34□□□□□ -0.43
CLK4-205ENST00000520199 PAK1IP1Q9NWT1 392 aaPredicted RBP12.34□□□□□ -0.43
CLK4-205ENST00000520199 MAGEB3O15480 346 aa12.33□□□□□ -0.44
CLK4-205ENST00000520199 MYL12AP19105 171 aa12.33□□□□□ -0.44
CLK4-205ENST00000520199 EBI3Q14213 229 aa12.33□□□□□ -0.44
CLK4-205ENST00000520199 FAM27D1Q5T7N8 215 aa12.33□□□□□ -0.44
CLK4-205ENST00000520199 C18orf65Q6ZTR6 163 aa12.33□□□□□ -0.44
CLK4-205ENST00000520199 Q8N6K4 173 aa12.33□□□□□ -0.44
CLK4-205ENST00000520199 NANOGP1Q8N7R0 232 aa12.33□□□□□ -0.44
CLK4-205ENST00000520199 C5orf56Q8N8D9 126 aa12.33□□□□□ -0.44
CLK4-205ENST00000520199 DTX3Q8N9I9 347 aa12.33□□□□□ -0.44
CLK4-205ENST00000520199 ZNF439Q8NDP4 499 aa12.33□□□□□ -0.44
CLK4-205ENST00000520199 CAPSLQ8WWF8 208 aa12.33□□□□□ -0.44
CLK4-205ENST00000520199 NRG4Q8WWG1 115 aa12.33□□□□□ -0.44
CLK4-205ENST00000520199 TFAP2CQ92754 450 aa12.33□□□□□ -0.44
CLK4-205ENST00000520199 BANF2Q9H503 90 aa12.33□□□□□ -0.44
CLK4-205ENST00000520199 LSM2Q9Y333 95 aaKnown RBP12.33□□□□□ -0.44
CLK4-205ENST00000520199 HSPE1-MOB4S4R3N1 261 aa12.33□□□□□ -0.44
CLK4-205ENST00000520199 IGHV3-43A0A0B4J1X8 118 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 IRGMA1A4Y4 181 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 ZNF736B4DX44 427 aaPredicted RBP12.32□□□□□ -0.44
CLK4-205ENST00000520199 C12orf77C9JDV5 145 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 IGHV3-43DP0DP04 118 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 CEACAM3P40198 252 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 PPP3R1P63098 170 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 MPV17LQ2QL34 196 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 GLIPR1L1Q6UWM5 242 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 UNQ9370/PRO34162Q6UXP9 181 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 ETV3LQ6ZN32 361 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 AHSA2Q719I0 299 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 SETD9Q8NE22 299 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 OR10A7Q8NGE5 316 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 TOMM40LQ969M1 308 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 RPEQ96AT9 228 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 CREB3L1Q96BA8 519 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 PHF21AQ96BD5 680 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 NOL4LQ96MY1 436 aaPredicted RBP12.32□□□□□ -0.44
CLK4-205ENST00000520199 PLSCR3Q9NRY6 295 aa12.32□□□□□ -0.44
CLK4-205ENST00000520199 CNOT2Q9NZN8 540 aaKnown RBP12.32□□□□□ -0.44
CLK4-205ENST00000520199 IGHV3-72A0A0B4J1Y9 119 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 TMEM30CPA0ZSE6 113 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 EFCAB10A6NFE3 127 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 CD1AP06126 327 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 CD37P11049 281 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 IGLL1P15814 213 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 RCC1P18754 421 aaPredicted RBP12.31□□□□□ -0.44
CLK4-205ENST00000520199 CELP19835 753 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 REG1BP48304 166 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 ZNF816Q0VGE8 651 aaPredicted RBP12.31□□□□□ -0.44
CLK4-205ENST00000520199 MADCAM1Q13477 382 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 HNF4GQ14541 408 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 SLC16A12Q6ZSM3 486 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 CENPVQ7Z7K6 275 aaPredicted RBP12.31□□□□□ -0.44
CLK4-205ENST00000520199 ZNF329Q86UD4 541 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 LINC00311Q8N616 119 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 BPIFB6Q8NFQ5 453 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 ARL11Q969Q4 196 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 CPNE2Q96FN4 548 aaPredicted RBP12.31□□□□□ -0.44
CLK4-205ENST00000520199 C8orf4Q9NR00 106 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 GFOD1Q9NXC2 390 aa12.31□□□□□ -0.44
CLK4-205ENST00000520199 MRPS28Q9Y2Q9 187 aaKnown RBP12.31□□□□□ -0.44
CLK4-205ENST00000520199 IGHV1-3A0A0C4DH29 117 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 SC5DO75845 299 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 IGKV1D-33P01593 117 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 IGKV1-33P01594 117 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 MAS1P04201 325 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 GTF2F2P13984 249 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 GZMHP20718 246 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 WNT4P56705 351 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 CT45A1Q5HYN5 189 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 ATAD3CQ5T2N8 411 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 FOXB2Q5VYV0 432 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 CCDC144NLQ6NUI1 221 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 LINC00596Q86U02 117 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 LRRTM1Q86UE6 522 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 C8orf59Q8N0T1 100 aaPredicted RBP12.3□□□□□ -0.44
CLK4-205ENST00000520199 OR4F17Q8NGA8 305 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 OR52M1Q8NGK5 317 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 OR4K15Q8NH41 348 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 OR1L1Q8NH94 360 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 CT45A3Q8NHU0 189 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 Q96M66 194 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 OR4F4Q96R69 305 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 LINC00527Q9UJ94 153 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 MOB4Q9Y3A3 225 aa12.3□□□□□ -0.44
CLK4-205ENST00000520199 HSD17B6O14756 317 aa12.29□□□□□ -0.44
CLK4-205ENST00000520199 ORC5O43913 435 aa12.29□□□□□ -0.44
CLK4-205ENST00000520199 CSTBP04080 98 aaKnown RBP12.29□□□□□ -0.44
CLK4-205ENST00000520199 FAM106CPP0CH98 169 aa12.29□□□□□ -0.44
CLK4-205ENST00000520199 MNDAP41218 407 aa12.29□□□□□ -0.44
CLK4-205ENST00000520199 IRF3Q14653 427 aa12.29□□□□□ -0.44
CLK4-205ENST00000520199 C6orf141Q5SZD1 244 aa12.29□□□□□ -0.44
CLK4-205ENST00000520199 SYT6Q5T7P8 510 aaPredicted RBP12.29□□□□□ -0.44
CLK4-205ENST00000520199 CDH26Q8IXH8 852 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms