RNA–Protein interactions for RNA: ENST00000519560.5

SLIT3-206, Transcript of slit guidance ligand 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLIT3, Length 9,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-206ENST00000519560 CNRIP1Q96F85 164 aaPredicted RBP12.17□□□□□ -0.46
SLIT3-206ENST00000519560 HIST1H4GQ99525 98 aa12.17□□□□□ -0.46
SLIT3-206ENST00000519560 WDR13Q9H1Z4 485 aa12.17□□□□□ -0.46
SLIT3-206ENST00000519560 RAB29O14966 203 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 XAF1Q6GPH4 301 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 Q8WTZ3 238 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 CDX2Q99626 313 aaPredicted RBP12.16□□□□□ -0.46
SLIT3-206ENST00000519560 TMEM265A0A087WTH1 108 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 IGHV3-13P01766 116 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 IGHV3-7P01780 117 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 POLR2GP62487 172 aaKnown RBP eCLIP12.16□□□□□ -0.46
SLIT3-206ENST00000519560 LINC00615Q96LM1 132 aaPredicted RBP12.16□□□□□ -0.46
SLIT3-206ENST00000519560 CDC42EP3Q9UKI2 254 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 RAXQ9Y2V3 346 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 OR2W5A6NFC9 320 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 PRRT4C9JH25 899 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 OR4X1Q8NH49 305 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 TSPAN32Q96QS1 320 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 DNAJB12Q9NXW2 375 aaKnown RBP12.16□□□□□ -0.46
SLIT3-206ENST00000519560 EXOGQ9Y2C4 368 aaKnown RBP12.16□□□□□ -0.46
SLIT3-206ENST00000519560 DEGS2Q6QHC5 323 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 SYT8Q8NBV8 401 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 FAM222BQ8WU58 562 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 RAB1CQ92928 201 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 MRGPRX3Q96LB0 322 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 DAOP14920 347 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 NEU3Q9UQ49 428 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 SELENOPP49908 381 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 CIRBPQ14011 172 aaKnown RBP12.16□□□□□ -0.46
SLIT3-206ENST00000519560 WDFY1Q8IWB7 410 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 RABAC1Q9UI14 185 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 COL11A1P12107 1806 aaPredicted RBP12.16□□□□□ -0.46
SLIT3-206ENST00000519560 NUDT3O95989 172 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 IGLV3-27P01718 113 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 FBXL6Q8N531 539 aa12.16□□□□□ -0.46
SLIT3-206ENST00000519560 PMELP40967 661 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 KLRB1Q12918 225 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 PRSS8Q16651 343 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 LINC00596Q86U02 117 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 RBM38Q9H0Z9 239 aaKnown RBP12.15□□□□□ -0.46
SLIT3-206ENST00000519560 SAP30LQ9HAJ7 183 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 ZNF32P17041 273 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 C16orf82Q7Z2V1 217 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 PRNTQ86SH4 94 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 SHISA8B8ZZ34 492 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 ZNF137PP52743 207 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 FOXO1Q12778 655 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 INSL4Q14641 139 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 NSUN5P2Q63ZY6 315 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 FADS6Q8N9I5 356 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 C10orf35Q96D05 121 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 NCOR1O75376 2440 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 FAM90A27PA6NNH2 459 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 PRR35P0CG20 571 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 RPS4XP62701 263 aaKnown RBP12.15□□□□□ -0.46
SLIT3-206ENST00000519560 CLEC18BQ6UXF7 455 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 NUP37Q8NFH4 326 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 OR10D3Q8NH80 312 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 NEURL2Q9BR09 285 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 TNFRSF19Q9NS68 423 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 ZNF107Q9UII5 783 aaPredicted RBP12.15□□□□□ -0.46
SLIT3-206ENST00000519560 A0A1B0GU03 582 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 CHST1O43916 411 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 PITX3O75364 302 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 DNAL4O96015 105 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 MRPS11P82912 194 aaKnown RBP12.15□□□□□ -0.46
SLIT3-206ENST00000519560 HSF4Q9ULV5 492 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 DOCK8Q8NF50 2099 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.15□□□□□ -0.46
SLIT3-206ENST00000519560 TCRBV16S1A1N1A0A5B0 115 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 ANKRD20A5PA0PJZ0 165 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 CCL7P80098 99 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 TEPPQ6URK8 271 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 C10orf126Q8N4M7 172 aa12.15□□□□□ -0.46
SLIT3-206ENST00000519560 TRBV5-4A0A0C4DH59 114 aa12.15□□□□□ -0.47
SLIT3-206ENST00000519560 VDAC1P21796 283 aa12.15□□□□□ -0.47
SLIT3-206ENST00000519560 FAM109BQ6ICB4 259 aaPredicted RBP12.15□□□□□ -0.47
SLIT3-206ENST00000519560 UBALD2Q8IYN6 164 aa12.15□□□□□ -0.47
SLIT3-206ENST00000519560 LRRC3BQ96PB8 259 aa12.15□□□□□ -0.47
SLIT3-206ENST00000519560 SMAD4Q13485 552 aaKnown RBP12.14□□□□□ -0.47
SLIT3-206ENST00000519560 SS18L1O75177 396 aaPredicted RBP12.14□□□□□ -0.47
SLIT3-206ENST00000519560 JOSD1Q15040 202 aaPredicted RBP12.14□□□□□ -0.47
SLIT3-206ENST00000519560 KCNMB1Q16558 191 aa12.14□□□□□ -0.47
SLIT3-206ENST00000519560 CRISPLD2Q9H0B8 497 aa12.14□□□□□ -0.47
SLIT3-206ENST00000519560 SRFP11831 508 aa12.14□□□□□ -0.47
SLIT3-206ENST00000519560 AESQ08117 197 aa12.14□□□□□ -0.47
SLIT3-206ENST00000519560 ZNF770Q6IQ21 691 aaPredicted RBP12.14□□□□□ -0.47
SLIT3-206ENST00000519560 HIGD1AQ9Y241 93 aa12.14□□□□□ -0.47
SLIT3-206ENST00000519560 SPTAN1Q13813 2472 aaKnown RBP12.14□□□□□ -0.47
SLIT3-206ENST00000519560 STAG3L3P0CL85 134 aa12.14□□□□□ -0.47
SLIT3-206ENST00000519560 PHF7Q9BWX1 381 aaPredicted RBP12.14□□□□□ -0.47
SLIT3-206ENST00000519560 CRHP06850 196 aa12.14□□□□□ -0.47
SLIT3-206ENST00000519560 GVQW1Q8N7I0 195 aa12.14□□□□□ -0.47
SLIT3-206ENST00000519560 HMGA1P17096 107 aaKnown RBP12.14□□□□□ -0.47
SLIT3-206ENST00000519560 SKP2Q13309 424 aa12.14□□□□□ -0.47
SLIT3-206ENST00000519560 ZNF273Q14593 569 aa12.14□□□□□ -0.47
SLIT3-206ENST00000519560 WIPI1Q5MNZ9 446 aaPredicted RBP12.14□□□□□ -0.47
SLIT3-206ENST00000519560 TMEM211Q6ICI0 200 aa12.14□□□□□ -0.47
SLIT3-206ENST00000519560 TBX21Q9UL17 535 aa12.14□□□□□ -0.47
SLIT3-206ENST00000519560 SDK2Q58EX2 2172 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms