RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 ZNF93P35789 620 aaPredicted RBP8.61□□□□□ -1.03
PVT1-208ENST00000519481 MYCNOSP40205 109 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 THBS3P49746 956 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 GTF2A1P52655 376 aaPredicted RBP8.61□□□□□ -1.03
PVT1-208ENST00000519481 RBM11P57052 281 aaKnown RBP8.61□□□□□ -1.03
PVT1-208ENST00000519481 ZNF816Q0VGE8 651 aaPredicted RBP8.61□□□□□ -1.03
PVT1-208ENST00000519481 MED21Q13503 144 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 GPR176Q14439 515 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 MPV17LQ2QL34 196 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 NHLRC3Q5JS37 347 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 UTF1Q5T230 341 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 ATAD3CQ5T2N8 411 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 ZNF529Q6P280 563 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 ASCL4Q6XD76 172 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 OR2W3Q7Z3T1 314 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 MRPL41Q8IXM3 137 aaKnown RBP8.61□□□□□ -1.03
PVT1-208ENST00000519481 KLHL30-AS1Q8NEE0 82 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 OR52M1Q8NGK5 317 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 ARL11Q969Q4 196 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 NOL4LQ96MY1 436 aaPredicted RBP8.61□□□□□ -1.03
PVT1-208ENST00000519481 IFT22Q9H7X7 185 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 FGF20Q9NP95 211 aaPredicted RBP8.61□□□□□ -1.03
PVT1-208ENST00000519481 CHCHD3Q9NX63 227 aaKnown RBP8.61□□□□□ -1.03
PVT1-208ENST00000519481 IL36GQ9NZH8 169 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 CKLFQ9UBR5 152 aa8.61□□□□□ -1.03
PVT1-208ENST00000519481 TRAV39A0A0B4J263 110 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 IGHV1-3A0A0C4DH29 117 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 A0A1W2PPE3 182 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 AP4M1O00189 453 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 SDCBPO00560 298 aaPredicted RBP8.6□□□□□ -1.03
PVT1-208ENST00000519481 IGHG2P01859 326 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 LIMS3P0CW19 117 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 LIMS4P0CW20 117 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 GTF2F2P13984 249 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 MYL12AP19105 171 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 SERPINA2P20848 420 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 DCKP27707 260 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 HOXD3P31249 432 aaPredicted RBP8.6□□□□□ -1.03
PVT1-208ENST00000519481 GP2P55259 537 aaKnown RBP8.6□□□□□ -1.03
PVT1-208ENST00000519481 CD69Q07108 199 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 EGFEM1PQ0D2K5 195 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 DIAPH2-AS1Q14236 149 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 TEX38Q6PEX7 206 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 C8orf86Q6ZUL3 223 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 STPG2Q8N412 459 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 OR2T10Q8NGZ9 312 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 SPACA1Q9HBV2 294 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 LINC00527Q9UJ94 153 aa8.6□□□□□ -1.03
PVT1-208ENST00000519481 DNAH3Q8TD57 4116 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 IGHV3-72A0A0B4J1Y9 119 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 WI2-2373I1.2A0A1W2PRP0 233 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 MCRIP1C9JLW8 97 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 AIPO00170 330 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 GEMIN2O14893 280 aaKnown RBP8.59□□□□□ -1.03
PVT1-208ENST00000519481 TXNL1O43396 289 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 RRP9O43818 475 aaKnown RBP8.59□□□□□ -1.03
PVT1-208ENST00000519481 ORC5O43913 435 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 REG1BP48304 166 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 KRTAP10-11P60412 298 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 RIPK1Q13546 671 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 EBI3Q14213 229 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 PNLIPRP3Q17RR3 467 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 TMEM30BQ3MIR4 351 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 Q3ZCU0 254 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 SLC22A6Q4U2R8 563 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 CXorf66Q5JRM2 361 aaPredicted RBP8.59□□□□□ -1.03
PVT1-208ENST00000519481 ETV3LQ6ZN32 361 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 TGIF2LXQ8IUE1 241 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 ZNF695Q8IW36 515 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 IZUMO1Q8IYV9 350 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 PQLC1Q8N2U9 271 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 LINC00311Q8N616 119 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 C8orf31Q8N9H6 132 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 CCDC107Q8WV48 283 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 RGP1Q92546 391 aaPredicted RBP8.59□□□□□ -1.03
PVT1-208ENST00000519481 SMIM19Q96E16 107 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 EAF1Q96JC9 268 aaPredicted RBP8.59□□□□□ -1.03
PVT1-208ENST00000519481 RDH12Q96NR8 316 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 SLC29A1Q99808 456 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 RASL11BQ9BPW5 248 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 LIN7CQ9NUP9 197 aaKnown RBP8.59□□□□□ -1.03
PVT1-208ENST00000519481 GFOD1Q9NXC2 390 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 BABAM2Q9NXR7 383 aa8.59□□□□□ -1.03
PVT1-208ENST00000519481 EXOSC1Q9Y3B2 195 aaKnown RBP8.59□□□□□ -1.03
PVT1-208ENST00000519481 OGG1O15527 345 aa8.58□□□□□ -1.04
PVT1-208ENST00000519481 SPINT2O43291 252 aa8.58□□□□□ -1.04
PVT1-208ENST00000519481 BAG2O95816 211 aa8.58□□□□□ -1.04
PVT1-208ENST00000519481 MOSP00540 346 aa8.58□□□□□ -1.04
PVT1-208ENST00000519481 CD1BP29016 333 aa8.58□□□□□ -1.04
PVT1-208ENST00000519481 ETV1P50549 477 aa8.58□□□□□ -1.04
PVT1-208ENST00000519481 RAB25P57735 213 aa8.58□□□□□ -1.04
PVT1-208ENST00000519481 C6orf183Q5T699 404 aa8.58□□□□□ -1.04
PVT1-208ENST00000519481 OR2G6Q5TZ20 316 aa8.58□□□□□ -1.04
PVT1-208ENST00000519481 TRAT1Q6PIZ9 186 aa8.58□□□□□ -1.04
PVT1-208ENST00000519481 OR8H1Q8NGG4 311 aa8.58□□□□□ -1.04
PVT1-208ENST00000519481 APH1BQ8WW43 257 aa8.58□□□□□ -1.04
PVT1-208ENST00000519481 MRPS24Q96EL2 167 aaKnown RBP8.58□□□□□ -1.04
PVT1-208ENST00000519481 ZNF184Q99676 751 aaPredicted RBP8.58□□□□□ -1.04
PVT1-208ENST00000519481 ABCG5Q9H222 651 aa8.58□□□□□ -1.04
PVT1-208ENST00000519481 S100A14Q9HCY8 104 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms