RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 PHB2Q99623 299 aa12.6□□□□□ -0.39
TRAPPC9-205ENST00000518839 RTBDNQ9BSG5 229 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-205ENST00000518839 TRAF4Q9BUZ4 470 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-205ENST00000518839 RAB1BQ9H0U4 201 aa12.6□□□□□ -0.39
TRAPPC9-205ENST00000518839 RANGRFQ9HD47 186 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-205ENST00000518839 TMEM106BQ9NUM4 274 aa12.6□□□□□ -0.39
TRAPPC9-205ENST00000518839 MGAT4CQ9UBM8 478 aa12.6□□□□□ -0.39
TRAPPC9-205ENST00000518839 KIF25Q9UIL4 384 aa12.6□□□□□ -0.39
TRAPPC9-205ENST00000518839 METRNQ9UJH8 293 aa12.6□□□□□ -0.39
TRAPPC9-205ENST00000518839 PPIAL4AQ9Y536 164 aa12.6□□□□□ -0.39
TRAPPC9-205ENST00000518839 RAI1Q7Z5J4 1906 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-205ENST00000518839 DSCAMO60469 2012 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 A0A0B4J2A0 478 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 IGHV1-69-2A0A0G2JMI3 117 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 SFT2D2O95562 160 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 DUS4LO95620 317 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 NFYAP23511 347 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 VAMP1P23763 118 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 CD34P28906 385 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 FXYD4P59646 89 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 HERPUD1Q15011 391 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 HFEQ30201 348 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 ZFP69Q49AA0 526 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 ABCA11PQ4W5N1 156 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 ZNF788Q6ZQV5 615 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 SGPP2Q8IWX5 399 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 FAM185AQ8N0U4 392 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 ZCCHC24Q8N2G6 241 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 ZNF565Q8N9K5 539 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 ADAD2Q8NCV1 583 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 OR2AK2Q8NG84 335 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 MITD1Q8WV92 249 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 TOMM40LQ969M1 308 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 VRK1Q99986 396 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 RSRP1Q9BUV0 290 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 TAF9BQ9HBM6 251 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 SHPKQ9UHJ6 478 aa12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 KLF2Q9Y5W3 355 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC9-205ENST00000518839 IGKV1-6A0A0C4DH72 117 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 A8MV72 311 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 SIGLEC5O15389 551 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 NDUFA2O43678 99 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 FSTL3O95633 263 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 PRB1P04280 392 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 GZMHP20718 246 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 P2RX3P56373 397 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 HOXA4Q00056 320 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 BAMBIQ13145 260 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 DTX2Q86UW9 622 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 H1FOOQ8IZA3 346 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 COQ8AQ8NI60 647 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 NEU4Q8WWR8 484 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 CCL17Q92583 94 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 TMEM230Q96A57 120 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 GALMQ96C23 342 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 TMPRSS13Q9BYE2 586 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 ZNF436Q9C0F3 470 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 LIME1Q9H400 295 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 OR6C3Q9NZP0 311 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 OR2W1Q9Y3N9 320 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 MAB21L2Q9Y586 359 aa12.58□□□□□ -0.4
TRAPPC9-205ENST00000518839 ODAMA1E959 279 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 C19orf84I3L1E1 186 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 SPINT2O43291 252 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 HSPA12AO43301 675 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 SLC22A5O76082 557 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 GIPP09681 153 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 S100GP29377 79 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 IL2RGP31785 369 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 GLIPR1P48060 266 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 MRPS11P82912 194 aaKnown RBP12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 CR1LQ2VPA4 569 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 FAM201AQ5SY85 155 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 C11orf71Q6IPW1 123 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 LIN54Q6MZP7 749 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 MEX3BQ6ZN04 569 aaKnown RBP12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 DEFB108BQ8NET1 73 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 FAM216AQ8WUB2 273 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 IL1F10Q8WWZ1 152 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 GAFA1Q96PS6 74 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 FYTTD1Q96QD9 318 aaKnown RBP12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 DLL4Q9NR61 685 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 KCNIP3Q9Y2W7 256 aa12.57□□□□□ -0.4
TRAPPC9-205ENST00000518839 TEX13DA0A0J9YY54 714 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC9-205ENST00000518839 CRYM-AS1A6NIL9 109 aa12.56□□□□□ -0.4
TRAPPC9-205ENST00000518839 A6NNC1 897 aa12.56□□□□□ -0.4
TRAPPC9-205ENST00000518839 C12orf77C9JDV5 145 aa12.56□□□□□ -0.4
TRAPPC9-205ENST00000518839 GPR31O00270 319 aa12.56□□□□□ -0.4
TRAPPC9-205ENST00000518839 C1QL1O75973 258 aa12.56□□□□□ -0.4
TRAPPC9-205ENST00000518839 GYPAP02724 150 aa12.56□□□□□ -0.4
TRAPPC9-205ENST00000518839 C1QBP02746 253 aa12.56□□□□□ -0.4
TRAPPC9-205ENST00000518839 TFF1P04155 84 aa12.56□□□□□ -0.4
TRAPPC9-205ENST00000518839 HLA-GP17693 338 aa12.56□□□□□ -0.4
TRAPPC9-205ENST00000518839 CXCL3P19876 107 aa12.56□□□□□ -0.4
TRAPPC9-205ENST00000518839 PIGPP57054 158 aa12.56□□□□□ -0.4
TRAPPC9-205ENST00000518839 RAP2BP61225 183 aa12.56□□□□□ -0.4
TRAPPC9-205ENST00000518839 RND3P61587 244 aa12.56□□□□□ -0.4
TRAPPC9-205ENST00000518839 EDDM3AQ14507 147 aa12.56□□□□□ -0.4
TRAPPC9-205ENST00000518839 UXS1Q8NBZ7 420 aa12.56□□□□□ -0.4
TRAPPC9-205ENST00000518839 ZNRF1Q8ND25 227 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms