RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TPTE2P1Q5T6R2 138 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 CTRB2Q6GPI1 263 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 Q6ZR54 194 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 SLC35D2Q76EJ3 337 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 CAMK2N1Q7Z7J9 78 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 GALNT10Q86SR1 603 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 ST13P4Q8IZP2 240 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 TBC1D19Q8N5T2 526 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 RNF10Q8N5U6 811 aaKnown RBP3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF433Q8N7K0 673 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 LRRC75AQ8NAA5 344 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR4F15Q8NGB8 312 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR52E5Q8NH55 327 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR6X1Q8NH79 312 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 LRRC20Q8TCA0 184 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 EEF1AKMT3Q96AZ1 226 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 SEH1LQ96EE3 360 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 TSSK3Q96PN8 268 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 MICU1Q9BPX6 476 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 RPF2Q9H7B2 306 aaKnown RBP3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 CTPS2Q9NRF8 586 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 PAQR5Q9NXK6 330 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 CHMP5Q9NZZ3 219 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 INSIG2Q9Y5U4 225 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 FAT2Q9NYQ8 4349 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 IQCF5A8MTL0 148 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 RNASEK-C17orf49H0YIS7 233 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 SMKR1H3BMG3 65 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 TRAPPC2LH3BP13 241 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 POLR3GO15318 223 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 AIFM1O95831 613 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 HPRT1P00492 218 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 RAB3BP20337 219 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 CCNOP22674 350 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 MIPP30301 263 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 GPX4P36969 197 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 HADHBP55084 474 aaKnown RBP3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 DSCR4P56555 118 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 RAB38P57729 211 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 NUTF2P61970 127 aaKnown RBP3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 SLC25A11Q02978 314 aaKnown RBP3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 EBPQ15125 230 aaKnown RBP3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 NNATQ16517 81 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 HBMQ6B0K9 141 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 MBOAT1Q6ZNC8 495 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 FAM122BQ7Z309 247 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 CD177Q8N6Q3 437 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 ASCC1Q8N9N2 400 aaKnown RBP3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 HSD17B11Q8NBQ5 300 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 FBXO36Q8NEA4 188 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR2L5Q8NG80 312 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR51L1Q8NGJ5 315 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 TMEM230Q96A57 120 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 PPWD1Q96BP3 646 aaKnown RBP3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 ARL5BQ96KC2 179 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 DOK1Q99704 481 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 TMEM38AQ9H6F2 299 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 RETNQ9HD89 108 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 CCL28Q9NRJ3 127 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 RCL1Q9Y2P8 373 aaKnown RBP3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
HMGB1P23-201ENST00000518743 PSMB11A5LHX3 300 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 NUPL2O15504 423 aaKnown RBP3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR1I1O60431 355 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 CTNSO60931 367 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 RP2O75695 350 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 GIPP09681 153 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 IGHV3-43DP0DP04 118 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 NR2C1P13056 603 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 TUBG1P23258 451 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 GATA2P23769 480 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 LYZP61626 148 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 PLCXD2Q0VAA5 305 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 TFDP2Q14188 446 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 USF2Q15853 346 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 SGCAQ16586 387 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 TRMT5Q32P41 509 aaKnown RBP3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF829Q3KNS6 432 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 FAM173BQ6P4H8 233 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 LRRN1Q6UXK5 716 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 TEX43Q6ZNM6 134 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 KRT222Q8N1A0 295 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 ISOC2Q96AB3 205 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 APH1AQ96BI3 265 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 FAM3DQ96BQ1 224 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 AURKBQ96GD4 344 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 SLC35E1Q96K37 410 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 RBBP8Q99708 897 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 RASL11BQ9BPW5 248 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 PATZ1Q9HBE1 687 aaKnown RBP3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 TUBG2Q9NRH3 451 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 ABCB10Q9NRK6 738 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 VPREB3Q9UKI3 123 aa3.31□□□□□ -1.88
HMGB1P23-201ENST00000518743 IGKV1D-13A0A0B4J2D9 117 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 LOC285095A0A1B0GVY8 99 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 GJE1A6NN92 205 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 C16orf90A8MZG2 172 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 NIPSNAP2O75323 286 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 SUPT7LO94864 414 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 CATP04040 527 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms