RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 Q6P435 159 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 RFLNAQ6ZTI6 216 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 RASSF6Q6ZTQ3 369 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 ASCL5Q7RTU5 278 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 PEX26Q7Z412 305 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 THOC6Q86W42 341 aaKnown RBP2.36□□□□□ -2.03
VPS13B-207ENST00000518569 ZNF433Q8N7K0 673 aaPredicted RBP2.36□□□□□ -2.03
VPS13B-207ENST00000518569 PRELID2Q8N945 189 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 ACOT4Q8N9L9 421 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 CT45A3Q8NHU0 189 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 ZFAND1Q8TCF1 268 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 SRSF12Q8WXF0 261 aaKnown RBP2.36□□□□□ -2.03
VPS13B-207ENST00000518569 TMEM234Q8WY98 164 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 EEF1AKMT3Q96AZ1 226 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 DDIT4LQ96D03 193 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 L3HYPDHQ96EM0 354 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 CPNE2Q96FN4 548 aaPredicted RBP2.36□□□□□ -2.03
VPS13B-207ENST00000518569 PDXPQ96GD0 296 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 DCUN1D1Q96GG9 259 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 SMARCD1Q96GM5 515 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 OR8B4Q96RC9 309 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 GPER1Q99527 375 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 SERPINI1Q99574 410 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 SIGMAR1Q99720 223 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 AGMATQ9BSE5 352 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 SUCNR1Q9BXA5 334 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 ACTR6Q9GZN1 396 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 KCNJ16Q9NPI9 418 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 ZNF331Q9NQX6 463 aaPredicted RBP2.36□□□□□ -2.03
VPS13B-207ENST00000518569 RGS18Q9NS28 235 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 TAS2R13Q9NYV9 303 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 OPTCQ9UBM4 332 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 PRO0628Q9UI54 55 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 ING4Q9UNL4 249 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 C14orf166Q9Y224 244 aaKnown RBP2.36□□□□□ -2.03
VPS13B-207ENST00000518569 TP53TG1Q9Y2A0 90 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 ADGRL2O95490 1459 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 PXDNQ92626 1479 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 QSER1Q2KHR3 1735 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 ASTN1O14525 1302 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 MROH7Q68CQ1 1323 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 N4BP2Q86UW6 1770 aaPredicted RBP2.36□□□□□ -2.03
VPS13B-207ENST00000518569 FRMPD3Q5JV73 1810 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 LRRC37A3O60309 1634 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 CASKIN1Q8WXD9 1431 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 A0A0U1RQV1 116 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 CENPVL3A0A0U1RRI6 287 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 A0A1W2PQ67 120 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 A6NDN8 102 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 K7EP13 123 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 FKBP6O75344 327 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 KLF8O95600 359 aaPredicted RBP2.35□□□□□ -2.03
VPS13B-207ENST00000518569 CYB5R3P00387 301 aaPredicted RBP2.35□□□□□ -2.03
VPS13B-207ENST00000518569 HPRT1P00492 218 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 CD8AP01732 235 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 PRB2P02812 416 aaPredicted RBP2.35□□□□□ -2.03
VPS13B-207ENST00000518569 ARG1P05089 322 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 TSPAN19P0C672 248 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 CD79AP11912 226 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 CRISP2P16562 243 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 RCC1P18754 421 aaPredicted RBP2.35□□□□□ -2.03
VPS13B-207ENST00000518569 RAB3AP20336 220 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 OMGP23515 440 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 PAX6P26367 422 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 CD34P28906 385 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 SLC6A1P30531 599 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 SHMT2P34897 504 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 TALDO1P37837 337 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 PMELP40967 661 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 GLP1RP43220 463 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 MAP2K4P45985 399 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 GPM6AP51674 278 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 CCR6P51684 374 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 AQP5P55064 265 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 CLDN12P56749 244 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 GNG3P63215 75 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 IL5RAQ01344 420 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 SEMG2Q02383 582 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 RPL18AQ02543 176 aaKnown RBP2.35□□□□□ -2.03
VPS13B-207ENST00000518569 BAMBIQ13145 260 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 SKP2Q13309 424 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 CLINT1Q14677 625 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 QPRTQ15274 297 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 BATFQ16520 125 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 SMIM21Q3B7S5 101 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 PAGE3Q5JUK9 113 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 SAMD13Q5VXD3 122 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 TMEM205Q6UW68 189 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 TOMM20LQ6UXN7 152 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 GRINAQ7Z429 371 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 ZBTB8OSQ8IWT0 167 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 SPICQ8N5J4 248 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 ATPAF2Q8N5M1 289 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 SLC26A10Q8NG04 563 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 OR4K15Q8NH41 348 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 HAVCR2Q8TDQ0 301 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 FAM151AQ8WW52 585 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 CYGBQ8WWM9 190 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 ASB17Q8WXJ9 295 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 OR5P2Q8WZ92 322 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms