RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 DSPP15924 2871 aaKnown RBP16.87■□□□□ 0.29
TRIO-223ENST00000515710 IGKV1D-17A0A075B6S4 117 aa16.87■□□□□ 0.29
TRIO-223ENST00000515710 TRBV6-7A0A0A0MS04 114 aa16.87■□□□□ 0.29
TRIO-223ENST00000515710 IGKV1-6A0A0C4DH72 117 aa16.87■□□□□ 0.29
TRIO-223ENST00000515710 TUSC2O75896 110 aa16.87■□□□□ 0.29
TRIO-223ENST00000515710 ZNF205O95201 554 aa16.87■□□□□ 0.29
TRIO-223ENST00000515710 CLDN14O95500 239 aa16.87■□□□□ 0.29
TRIO-223ENST00000515710 CTRB1P17538 263 aa16.87■□□□□ 0.29
TRIO-223ENST00000515710 SUPT4H1P63272 117 aaKnown RBP16.87■□□□□ 0.29
TRIO-223ENST00000515710 CTRB2Q6GPI1 263 aa16.87■□□□□ 0.29
TRIO-223ENST00000515710 SGPP2Q8IWX5 399 aa16.87■□□□□ 0.29
TRIO-223ENST00000515710 OR2T35Q8NGX2 323 aa16.87■□□□□ 0.29
TRIO-223ENST00000515710 LILRB1Q8NHL6 650 aaPredicted RBP16.87■□□□□ 0.29
TRIO-223ENST00000515710 COQ8AQ8NI60 647 aa16.87■□□□□ 0.29
TRIO-223ENST00000515710 CISD1Q9NZ45 108 aaKnown RBP16.87■□□□□ 0.29
TRIO-223ENST00000515710 METRNQ9UJH8 293 aa16.87■□□□□ 0.29
TRIO-223ENST00000515710 LEUTXA8MZ59 168 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 RPS2P15880 293 aaKnown RBP16.86■□□□□ 0.29
TRIO-223ENST00000515710 DNASE1P24855 282 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 HMGN3Q15651 99 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 ABCA11PQ4W5N1 156 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 C5orf24Q7Z6I8 188 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 RSRP1Q9BUV0 290 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 SHARPINQ9H0F6 387 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 KCNIP1Q9NZI2 227 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 CRYM-AS1A6NIL9 109 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 NPIPB11E5RHQ5 1161 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 SIX6O95475 246 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 GABRA2P47869 451 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 UQCRFS1P47985 274 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 H2BFSP57053 126 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 CCL8P80075 99 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 AESQ08117 197 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 OR5M8Q8NGP6 311 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 OR10J5Q8NHC4 309 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 TMEM204Q9BSN7 226 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 DYNLRB1Q9NP97 96 aa16.86■□□□□ 0.29
TRIO-223ENST00000515710 IGHV3OR15-7A0A075B7D8 119 aa16.85■□□□□ 0.29
TRIO-223ENST00000515710 LRRC30A6NM36 301 aa16.85■□□□□ 0.29
TRIO-223ENST00000515710 DBX1A6NMT0 343 aa16.85■□□□□ 0.29
TRIO-223ENST00000515710 SIAH2O43255 324 aa16.85■□□□□ 0.29
TRIO-223ENST00000515710 ZNF737O75373 536 aa16.85■□□□□ 0.29
TRIO-223ENST00000515710 RGS11O94810 467 aa16.85■□□□□ 0.29
TRIO-223ENST00000515710 PLAUP00749 431 aa16.85■□□□□ 0.29
TRIO-223ENST00000515710 MST1LQ2TV78 715 aa16.85■□□□□ 0.29
TRIO-223ENST00000515710 ZNF672Q499Z4 452 aaPredicted RBP16.85■□□□□ 0.29
TRIO-223ENST00000515710 COQ2Q96H96 371 aa16.85■□□□□ 0.29
TRIO-223ENST00000515710 KCNIP3Q9Y2W7 256 aa16.85■□□□□ 0.29
TRIO-223ENST00000515710 SPTA1P02549 2419 aa16.85■□□□□ 0.29
TRIO-223ENST00000515710 PCNX1Q96RV3 2341 aa16.85■□□□□ 0.29
TRIO-223ENST00000515710 TEX13DA0A0J9YY54 714 aaPredicted RBP16.84■□□□□ 0.29
TRIO-223ENST00000515710 OOEPA6NGQ2 149 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 DEFB108AA8MXU0 73 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 CYB5R3P00387 301 aaPredicted RBP16.84■□□□□ 0.29
TRIO-223ENST00000515710 IFNA2P01563 188 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 LOXP28300 417 aaPredicted RBP16.84■□□□□ 0.29
TRIO-223ENST00000515710 CD80P33681 288 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 PIGPP57054 158 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 SRSF4Q08170 494 aaKnown RBP16.84■□□□□ 0.29
TRIO-223ENST00000515710 SLC9A3R2Q15599 337 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 KRBOX4Q5JUW0 171 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 LY6G6FQ5SQ64 297 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 KCTD9Q7L273 389 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 CCDC71LQ8N9Z2 235 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 ITLN2Q8WWU7 325 aaPredicted RBP16.84■□□□□ 0.29
TRIO-223ENST00000515710 KIRREL1Q96J84 757 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 AIFM2Q9BRQ8 373 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 SAP30LQ9HAJ7 183 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 TAF9BQ9HBM6 251 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 OPN4Q9UHM6 478 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 KIF25Q9UIL4 384 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 TRAV39A0A0B4J263 110 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 MGST3O14880 152 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 TFF1P04155 84 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 MUC1P15941 1255 aaPredicted RBP16.84■□□□□ 0.29
TRIO-223ENST00000515710 DCAF12L2Q5VW00 463 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 TRAT1Q6PIZ9 186 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 H1FOOQ8IZA3 346 aaPredicted RBP16.84■□□□□ 0.29
TRIO-223ENST00000515710 FAM185AQ8N0U4 392 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 ZNF565Q8N9K5 539 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 CITED4Q96RK1 184 aa16.84■□□□□ 0.29
TRIO-223ENST00000515710 ZZEF1O43149 2961 aa16.83■□□□□ 0.29
TRIO-223ENST00000515710 CHD3Q12873 2000 aaKnown RBP16.83■□□□□ 0.28
TRIO-223ENST00000515710 RBMXP38159 391 aaKnown RBP16.83■□□□□ 0.28
TRIO-223ENST00000515710 TEX36Q5VZQ5 186 aa16.83■□□□□ 0.28
TRIO-223ENST00000515710 LAMTOR1Q6IAA8 161 aa16.83■□□□□ 0.28
TRIO-223ENST00000515710 C1orf87Q8N0U7 546 aa16.83■□□□□ 0.28
TRIO-223ENST00000515710 ZNF561Q8N587 486 aa16.83■□□□□ 0.28
TRIO-223ENST00000515710 RTN4IP1Q8WWV3 396 aaPredicted RBP16.83■□□□□ 0.28
TRIO-223ENST00000515710 LURAP1Q96LR2 239 aa16.83■□□□□ 0.28
TRIO-223ENST00000515710 OR2W1Q9Y3N9 320 aa16.83■□□□□ 0.28
TRIO-223ENST00000515710 G3V3Q6 166 aa16.82■□□□□ 0.28
TRIO-223ENST00000515710 ZG16O60844 167 aa16.82■□□□□ 0.28
TRIO-223ENST00000515710 SWI5Q1ZZU3 235 aa16.82■□□□□ 0.28
TRIO-223ENST00000515710 ZCCHC24Q8N2G6 241 aaKnown RBP16.82■□□□□ 0.28
TRIO-223ENST00000515710 OR5D13Q8NGL4 314 aa16.82■□□□□ 0.28
TRIO-223ENST00000515710 IL1F10Q8WWZ1 152 aa16.82■□□□□ 0.28
TRIO-223ENST00000515710 GALNT14Q96FL9 552 aa16.82■□□□□ 0.28
TRIO-223ENST00000515710 SDSLQ96GA7 329 aa16.82■□□□□ 0.28
TRIO-223ENST00000515710 NAA60Q9H7X0 242 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms