RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 ZNF580Q9UK33 172 aa12.27□□□□□ -0.45
LMNA-223ENST00000515459 HUWE1Q7Z6Z7 4374 aaKnown RBP12.27□□□□□ -0.45
LMNA-223ENST00000515459 DAPL1A0PJW8 107 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 OR4C45A6NMZ5 311 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 IGF1P05019 195 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 FRMD6-AS1P0C7T7 363 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 IL3RAP26951 378 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 ZNF616Q08AN1 781 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 ATP6AP1Q15904 470 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 ASPHD1Q5U4P2 390 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 TMEM65Q6PI78 240 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 C8orf31Q8N9H6 132 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 CCDC197Q8NCU1 140 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 OR52M1Q8NGK5 317 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 MYOZ3Q8TDC0 251 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 RNFT2Q96EX2 444 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 CPNE2Q96FN4 548 aaPredicted RBP12.26□□□□□ -0.45
LMNA-223ENST00000515459 UBE2E2Q96LR5 201 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 CIB1Q99828 191 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 CHCHD6Q9BRQ6 235 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 ISYNA1Q9NPH2 558 aa12.26□□□□□ -0.45
LMNA-223ENST00000515459 ZNF736B4DX44 427 aaPredicted RBP12.25□□□□□ -0.45
LMNA-223ENST00000515459 I3L521 148 aa12.25□□□□□ -0.45
LMNA-223ENST00000515459 SDCBPO00560 298 aaPredicted RBP12.25□□□□□ -0.45
LMNA-223ENST00000515459 GYG2O15488 501 aa12.25□□□□□ -0.45
LMNA-223ENST00000515459 POLR2IP36954 125 aaKnown RBP12.25□□□□□ -0.45
LMNA-223ENST00000515459 F2RL1P55085 397 aa12.25□□□□□ -0.45
LMNA-223ENST00000515459 RUNX1Q01196 453 aa12.25□□□□□ -0.45
LMNA-223ENST00000515459 ALKBH1Q13686 389 aaKnown RBP12.25□□□□□ -0.45
LMNA-223ENST00000515459 RSU1Q15404 277 aa12.25□□□□□ -0.45
LMNA-223ENST00000515459 PIGYQ3MUY2 71 aa12.25□□□□□ -0.45
LMNA-223ENST00000515459 DNAL1Q4LDG9 190 aa12.25□□□□□ -0.45
LMNA-223ENST00000515459 ZNF491Q8N8L2 437 aa12.25□□□□□ -0.45
LMNA-223ENST00000515459 SUMF2Q8NBJ7 301 aa12.25□□□□□ -0.45
LMNA-223ENST00000515459 ARL11Q969Q4 196 aa12.25□□□□□ -0.45
LMNA-223ENST00000515459 ST6GALNAC6Q969X2 333 aa12.25□□□□□ -0.45
LMNA-223ENST00000515459 PELI1Q96FA3 418 aa12.25□□□□□ -0.45
LMNA-223ENST00000515459 CITED4Q96RK1 184 aa12.25□□□□□ -0.45
LMNA-223ENST00000515459 GPER1Q99527 375 aa12.25□□□□□ -0.45
LMNA-223ENST00000515459 DPCDQ9BVM2 203 aaPredicted RBP12.25□□□□□ -0.45
LMNA-223ENST00000515459 GNB4Q9HAV0 340 aa12.25□□□□□ -0.45
LMNA-223ENST00000515459 CHCHD3Q9NX63 227 aaKnown RBP12.25□□□□□ -0.45
LMNA-223ENST00000515459 C15orf65H3BRN8 121 aa12.24□□□□□ -0.45
LMNA-223ENST00000515459 J3QLW9 94 aa12.24□□□□□ -0.45
LMNA-223ENST00000515459 TXNL1O43396 289 aa12.24□□□□□ -0.45
LMNA-223ENST00000515459 SAP30O75446 220 aa12.24□□□□□ -0.45
LMNA-223ENST00000515459 ZNF19P17023 458 aa12.24□□□□□ -0.45
LMNA-223ENST00000515459 LPCAT4Q643R3 524 aa12.24□□□□□ -0.45
LMNA-223ENST00000515459 PARP16Q8N5Y8 322 aa12.24□□□□□ -0.45
LMNA-223ENST00000515459 OR10K1Q8NGX5 313 aa12.24□□□□□ -0.45
LMNA-223ENST00000515459 TNFAIP8L1Q8WVP5 186 aa12.24□□□□□ -0.45
LMNA-223ENST00000515459 GABARAPL3Q9BY60 117 aa12.24□□□□□ -0.45
LMNA-223ENST00000515459 KLK15Q9H2R5 256 aa12.24□□□□□ -0.45
LMNA-223ENST00000515459 RIBC2Q9H4K1 309 aa12.24□□□□□ -0.45
LMNA-223ENST00000515459 GFOD1Q9NXC2 390 aa12.24□□□□□ -0.45
LMNA-223ENST00000515459 ZNF107Q9UII5 783 aaPredicted RBP12.24□□□□□ -0.45
LMNA-223ENST00000515459 VSIG4Q9Y279 399 aa12.24□□□□□ -0.45
LMNA-223ENST00000515459 RYR2Q92736 4967 aa12.24□□□□□ -0.45
LMNA-223ENST00000515459 TMEM30CPA0ZSE6 113 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 J3QRE1 110 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 GABRPO00591 440 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 OVOL1O14753 267 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 MAGEB3O15480 346 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 ORC5O43913 435 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 HTR3BO95264 441 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 RPSAP08865 295 aaKnown RBP12.23□□□□□ -0.45
LMNA-223ENST00000515459 SPNP16150 400 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 PPIFP30405 207 aaKnown RBP12.23□□□□□ -0.45
LMNA-223ENST00000515459 GNB1P62873 340 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 KIAA0141Q14154 515 aaPredicted RBP12.23□□□□□ -0.45
LMNA-223ENST00000515459 Q3ZCU0 254 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 ZFAND6Q6FIF0 208 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 SATL1Q86VE3 508 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 DCUN1D4Q92564 292 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 C4orf36Q96KX1 117 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 OR5B12Q96R08 314 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 FAM192AQ9GZU8 254 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 IFT22Q9H7X7 185 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 DHDHQ9UQ10 334 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 ST3GAL6Q9Y274 331 aa12.23□□□□□ -0.45
LMNA-223ENST00000515459 IGHV3-43A0A0B4J1X8 118 aa12.22□□□□□ -0.45
LMNA-223ENST00000515459 IGHV3-43DP0DP04 118 aa12.22□□□□□ -0.45
LMNA-223ENST00000515459 SLC2A2P11168 524 aaPredicted RBP12.22□□□□□ -0.45
LMNA-223ENST00000515459 GP9P14770 177 aa12.22□□□□□ -0.45
LMNA-223ENST00000515459 RAB3AP20336 220 aa12.22□□□□□ -0.45
LMNA-223ENST00000515459 FASP25445 335 aa12.22□□□□□ -0.45
LMNA-223ENST00000515459 FAM53AQ6NSI3 398 aaPredicted RBP12.22□□□□□ -0.45
LMNA-223ENST00000515459 ACBD7Q8N6N7 88 aa12.22□□□□□ -0.45
LMNA-223ENST00000515459 UBALD1Q8TB05 177 aa12.22□□□□□ -0.45
LMNA-223ENST00000515459 TSEN15Q8WW01 171 aaKnown RBP12.22□□□□□ -0.45
LMNA-223ENST00000515459 TRUB1Q8WWH5 349 aaKnown RBP12.22□□□□□ -0.45
LMNA-223ENST00000515459 OR51J1Q9H342 316 aa12.22□□□□□ -0.45
LMNA-223ENST00000515459 ZNF581Q9P0T4 197 aa12.22□□□□□ -0.45
LMNA-223ENST00000515459 LYSTQ99698 3801 aa12.21□□□□□ -0.45
LMNA-223ENST00000515459 TMEM212A6NML5 194 aa12.21□□□□□ -0.45
LMNA-223ENST00000515459 G3V318 75 aa12.21□□□□□ -0.45
LMNA-223ENST00000515459 OR7C1O76099 320 aaPredicted RBP12.21□□□□□ -0.45
LMNA-223ENST00000515459 IGLV1-40P01703 118 aa12.21□□□□□ -0.45
LMNA-223ENST00000515459 MYF6P23409 242 aa12.21□□□□□ -0.45
LMNA-223ENST00000515459 ZNF137PP52743 207 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms