RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 C1orf64Q8NEQ6 169 aa4□□□□□ -1.77
NUP54-215ENST00000514313 OR4A5Q8NH83 315 aa4□□□□□ -1.77
NUP54-215ENST00000514313 STOML3Q8TAV4 291 aa4□□□□□ -1.77
NUP54-215ENST00000514313 SMIM12Q96EX1 92 aa4□□□□□ -1.77
NUP54-215ENST00000514313 ZNF230Q9UIE0 474 aaPredicted RBP4□□□□□ -1.77
NUP54-215ENST00000514313 PTPRKQ15262 1439 aa3.99□□□□□ -1.77
NUP54-215ENST00000514313 GOLGA8KD6RF30 607 aa3.99□□□□□ -1.77
NUP54-215ENST00000514313 GOLGA8MH3BSY2 632 aa3.99□□□□□ -1.77
NUP54-215ENST00000514313 RTL8CO15255 209 aa3.99□□□□□ -1.77
NUP54-215ENST00000514313 ADORA1P30542 326 aa3.99□□□□□ -1.77
NUP54-215ENST00000514313 RPS11P62280 158 aaKnown RBP eCLIP3.99□□□□□ -1.77
NUP54-215ENST00000514313 CASP8Q14790 479 aa3.99□□□□□ -1.77
NUP54-215ENST00000514313 HES3Q5TGS1 186 aa3.99□□□□□ -1.77
NUP54-215ENST00000514313 FAM151BQ6UXP7 276 aa3.99□□□□□ -1.77
NUP54-215ENST00000514313 TCF23Q7RTU1 214 aa3.99□□□□□ -1.77
NUP54-215ENST00000514313 ZNRF2Q8NHG8 242 aa3.99□□□□□ -1.77
NUP54-215ENST00000514313 SUN5Q8TC36 379 aa3.99□□□□□ -1.77
NUP54-215ENST00000514313 OR2V2Q96R30 315 aa3.99□□□□□ -1.77
NUP54-215ENST00000514313 DRC3Q9H069 523 aa3.99□□□□□ -1.77
NUP54-215ENST00000514313 OR5H14A6NHG9 310 aa3.98□□□□□ -1.77
NUP54-215ENST00000514313 H3BQ85 93 aa3.98□□□□□ -1.77
NUP54-215ENST00000514313 CCRL2O00421 344 aa3.98□□□□□ -1.77
NUP54-215ENST00000514313 SOX14O95416 240 aa3.98□□□□□ -1.77
NUP54-215ENST00000514313 INAFM2P0DMQ5 153 aa3.98□□□□□ -1.77
NUP54-215ENST00000514313 INPP1P49441 399 aa3.98□□□□□ -1.77
NUP54-215ENST00000514313 SPNS3Q6ZMD2 512 aa3.98□□□□□ -1.77
NUP54-215ENST00000514313 OR5D18Q8NGL1 313 aa3.98□□□□□ -1.77
NUP54-215ENST00000514313 OR9I1Q8NGQ6 314 aa3.98□□□□□ -1.77
NUP54-215ENST00000514313 ARL5BQ96KC2 179 aa3.98□□□□□ -1.77
NUP54-215ENST00000514313 POTEKPQ9BYX7 375 aa3.98□□□□□ -1.77
NUP54-215ENST00000514313 METTL9Q9H1A3 318 aa3.98□□□□□ -1.77
NUP54-215ENST00000514313 TRAPPC1Q9Y5R8 145 aa3.98□□□□□ -1.77
NUP54-215ENST00000514313 GPR179Q6PRD1 2367 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 A0A0A6YYH2 397 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 DAPL1A0PJW8 107 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 A6NJ64 397 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 KLF3P57682 345 aaPredicted RBP3.97□□□□□ -1.77
NUP54-215ENST00000514313 MMDQ15546 238 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 HLA-DRB5Q30154 266 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 HENMT1Q5T8I9 393 aaKnown RBP3.97□□□□□ -1.77
NUP54-215ENST00000514313 ZNF660Q6AZW8 331 aaPredicted RBP3.97□□□□□ -1.77
NUP54-215ENST00000514313 VN1R4Q7Z5H5 301 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 OR52E4Q8NGH9 312 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 KCTD4Q8WVF5 259 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 TAMM41Q96BW9 452 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 OTUB2Q96DC9 234 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 CMBLQ96DG6 245 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 PYURFQ96I23 114 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 B9D2Q9BPU9 175 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 OR2D2Q9H210 308 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 PLEKHJ1Q9NW61 149 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 NKIRAS1Q9NYS0 192 aa3.97□□□□□ -1.77
NUP54-215ENST00000514313 METTL15A6NJ78 407 aa3.96□□□□□ -1.78
NUP54-215ENST00000514313 ARGFXA6NJG6 315 aa3.96□□□□□ -1.78
NUP54-215ENST00000514313 HPGDSO60760 199 aa3.96□□□□□ -1.78
NUP54-215ENST00000514313 PDYNP01213 254 aa3.96□□□□□ -1.78
NUP54-215ENST00000514313 HIST1H1CP16403 213 aaKnown RBP3.96□□□□□ -1.78
NUP54-215ENST00000514313 COILP38432 576 aaPredicted RBP3.96□□□□□ -1.78
NUP54-215ENST00000514313 CLEC12BQ2HXU8 276 aa3.96□□□□□ -1.78
NUP54-215ENST00000514313 KRTAP13-3Q3SY46 172 aa3.96□□□□□ -1.78
NUP54-215ENST00000514313 PDZD11Q5EBL8 140 aa3.96□□□□□ -1.78
NUP54-215ENST00000514313 C2orf73Q8N5S3 287 aaPredicted RBP3.96□□□□□ -1.78
NUP54-215ENST00000514313 KRTCAP2Q8N6L1 136 aa3.96□□□□□ -1.78
NUP54-215ENST00000514313 ALX4Q9H161 411 aaPredicted RBP3.96□□□□□ -1.78
NUP54-215ENST00000514313 TP53TG1Q9Y2A0 90 aa3.96□□□□□ -1.78
NUP54-215ENST00000514313 MTCH2Q9Y6C9 303 aa3.96□□□□□ -1.78
NUP54-215ENST00000514313 NUP205Q92621 2012 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 A0A0B4J2C4 111 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 A6NED7 52 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 H3BMM0 161 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 GPR75O95800 540 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 IGLV3-19P01714 112 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 SULT1A2P50226 295 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 FLI1Q01543 452 aaPredicted RBP3.95□□□□□ -1.78
NUP54-215ENST00000514313 C1DQ13901 141 aaKnown RBP3.95□□□□□ -1.78
NUP54-215ENST00000514313 LRRC26Q2I0M4 334 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 ZFAND6Q6FIF0 208 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 DNM1P34Q6PK57 102 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 PAGE2Q7Z2X7 111 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 DOLPP1Q86YN1 238 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 TMEM251Q8N6I4 163 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 FER1L6-AS1Q8NA97 138 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 UBE2WQ96B02 151 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 PPCDCQ96CD2 204 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 TMEM208Q9BTX3 173 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.95□□□□□ -1.78
NUP54-215ENST00000514313 CLUHO75153 1309 aa3.95□□□□□ -1.78
NUP54-215ENST00000514313 TINCRA0A1B0GVN0 87 aa3.94□□□□□ -1.78
NUP54-215ENST00000514313 VGLL3A8MV65 326 aa3.94□□□□□ -1.78
NUP54-215ENST00000514313 LTAP01374 205 aa3.94□□□□□ -1.78
NUP54-215ENST00000514313 CTSEP14091 401 aa3.94□□□□□ -1.78
NUP54-215ENST00000514313 PRPS1L1P21108 318 aa3.94□□□□□ -1.78
NUP54-215ENST00000514313 AGTR1P30556 359 aa3.94□□□□□ -1.78
NUP54-215ENST00000514313 SMAGPQ0VAQ4 97 aa3.94□□□□□ -1.78
NUP54-215ENST00000514313 MED21Q13503 144 aa3.94□□□□□ -1.78
NUP54-215ENST00000514313 IGFBP7Q16270 282 aa3.94□□□□□ -1.78
NUP54-215ENST00000514313 ZCWPW2Q504Y3 356 aa3.94□□□□□ -1.78
NUP54-215ENST00000514313 EBLN2Q6P2I7 272 aa3.94□□□□□ -1.78
NUP54-215ENST00000514313 TMEM156Q8N614 296 aa3.94□□□□□ -1.78
NUP54-215ENST00000514313 OR5K1Q8NHB7 308 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms