RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 ZNF584Q8IVC4 421 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 OR9K2Q8NGE7 335 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 OR6N2Q8NGY6 317 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 SLAMF9Q96A28 289 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 NABP1Q96AH0 204 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 ZNF71Q9NQZ8 489 aaPredicted RBP6.33□□□□□ -1.4
CLIP1-205ENST00000514271 DHDHQ9UQ10 334 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 NOP16Q9Y3C1 178 aaKnown RBP6.33□□□□□ -1.4
CLIP1-205ENST00000514271 C2orf72A6NCS6 295 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 H7C1C5 153 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 ITGB1BP1O14713 200 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 PGA4P0DJD7 388 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 PGA3P0DJD8 388 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 GP1BBP13224 206 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 HLA-DOBP13765 273 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 FOXL2P58012 376 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 RPL15P61313 204 aaKnown RBP6.33□□□□□ -1.4
CLIP1-205ENST00000514271 LCN6P62502 163 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 LY6DQ14210 128 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 RNASE10Q5GAN6 216 aaKnown RBP6.33□□□□□ -1.4
CLIP1-205ENST00000514271 SSX9Q7RTT3 188 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 SSX7Q7RTT5 188 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 GRINAQ7Z429 371 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 FAM220AQ7Z4H9 259 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 C1QL2Q7Z5L3 287 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 CA5BP1Q8WTZ4 195 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 DPF1Q92782 380 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 RAB3CQ96E17 227 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 RARRES2Q99969 163 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 VKORC1Q9BQB6 163 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 PECRQ9BY49 303 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 CHST11Q9NPF2 352 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 AURKAIP1Q9NWT8 199 aaPredicted RBP6.33□□□□□ -1.4
CLIP1-205ENST00000514271 PRR13Q9NZ81 148 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 HHLA2Q9UM44 414 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 LOC102723971A0A1B0GUV8 181 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 DHRS7CA6NNS2 312 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 C17orf51A8MQB3 221 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 J3QKU1 62 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 MMP9P14780 707 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 GAMTQ14353 236 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 HNF4GQ14541 408 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 NCMAPQ5T1S8 102 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 GFRALQ6UXV0 394 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 FAM24BQ8N5W8 94 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 OR5T1Q8NG75 326 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 FRZBQ92765 325 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 SNRNP40Q96DI7 357 aaKnown RBP6.33□□□□□ -1.4
CLIP1-205ENST00000514271 SLC25A44Q96H78 314 aaPredicted RBP6.33□□□□□ -1.4
CLIP1-205ENST00000514271 MED6O75586 246 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 PMP2P02689 132 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 DBHP09172 617 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 CA7P43166 264 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 POLR2HP52434 150 aaKnown RBP6.32□□□□□ -1.4
CLIP1-205ENST00000514271 CSNK2A1P68400 391 aaPredicted RBP6.32□□□□□ -1.4
CLIP1-205ENST00000514271 MRPS11P82912 194 aaKnown RBP6.32□□□□□ -1.4
CLIP1-205ENST00000514271 TMEM249Q2WGJ8 235 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 WDR25Q64LD2 544 aaPredicted RBP6.32□□□□□ -1.4
CLIP1-205ENST00000514271 CD163Q86VB7 1156 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 TMEM183AQ8IXX5 376 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 ZNF808Q8N4W9 903 aaPredicted RBP6.32□□□□□ -1.4
CLIP1-205ENST00000514271 LFNGQ8NES3 379 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 OR5D14Q8NGL3 314 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 OR6K6Q8NGW6 343 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 TCTEX1D2Q8WW35 142 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 C10orf35Q96D05 121 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 RAB39BQ96DA2 213 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 ADGRG7Q96K78 797 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 NOL4LQ96MY1 436 aaPredicted RBP6.32□□□□□ -1.4
CLIP1-205ENST00000514271 SEPSECSQ9HD40 501 aaKnown RBP6.32□□□□□ -1.4
CLIP1-205ENST00000514271 GPR84Q9NQS5 396 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 MLNRO43193 412 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 RPP14O95059 124 aaKnown RBP6.32□□□□□ -1.4
CLIP1-205ENST00000514271 AMBPP02760 352 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 GLRA1P23415 457 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 ACTL10Q5JWF8 245 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 PERPQ96FX8 193 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 VCX2Q9H322 139 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 HRH4Q9H3N8 390 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 TP53TG3Q9ULZ0 132 aa6.32□□□□□ -1.4
CLIP1-205ENST00000514271 NCOA6Q14686 2063 aaPredicted RBP6.32□□□□□ -1.4
CLIP1-205ENST00000514271 C3orf80F5H4A9 247 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 HCKP08631 526 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 SLC25A6P12236 298 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 TIMP3P35625 211 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 H3F3AP84243 136 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 ID3Q02535 119 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 UBE2V2Q15819 145 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 PLPPR5Q32ZL2 321 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 GGNBP1Q5YKI7 109 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 ZNF585AQ6P3V2 769 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 ZNF880Q6PDB4 577 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 TGIF2LYQ8IUE0 185 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 WDSUB1Q8N9V3 476 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 ACBD4Q8NC06 268 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 FAM46BQ96A09 425 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 MRPL24Q96A35 216 aaKnown RBP6.31□□□□□ -1.4
CLIP1-205ENST00000514271 S100A13Q99584 98 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 PBOV1Q9GZY1 135 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 DEPPQ9NTK1 212 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms