RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ZNF230Q9UIE0 474 aaPredicted RBP10.34□□□□□ -0.75
PDPN-210ENST00000513143 RPUSD1Q9UJJ7 312 aaKnown RBP10.34□□□□□ -0.75
PDPN-210ENST00000513143 MGAT4AQ9UM21 535 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 UBE2J1Q9Y385 318 aaPredicted RBP10.34□□□□□ -0.75
PDPN-210ENST00000513143 LINC00312Q9Y6C7 94 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 MYO9AB2RTY4 2548 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 WNK2Q9Y3S1 2297 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 TRGV10A0A0A0MS01 117 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 LANCL1O43813 399 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 ORC5O43913 435 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 GZMHP20718 246 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 ACTBP60709 375 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 ACTG1P63261 375 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 LCN2P80188 198 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 PAX2Q02962 417 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 ZNF273Q14593 569 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 C6orf183Q5T699 404 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 TRAT1Q6PIZ9 186 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 FAM185AQ8N0U4 392 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 SETD6Q8TBK2 473 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 MRGPRDQ8TDS7 321 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 TRIM63Q969Q1 353 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 DACT3Q96B18 629 aaPredicted RBP10.33□□□□□ -0.76
PDPN-210ENST00000513143 CCDC32Q9BV29 185 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 IFT46Q9NQC8 304 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 TAS2R3Q9NYW6 316 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 OPN4Q9UHM6 478 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 ITGB1BP2Q9UKP3 347 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 ITPR3Q14573 2671 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.33□□□□□ -0.76
PDPN-210ENST00000513143 PPIAL4CA0A0B4J2A2 164 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 KIR2DS1A0A191URI9 304 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 MEX3AA1L020 520 aaKnown RBP10.33□□□□□ -0.76
PDPN-210ENST00000513143 TRDCB7Z8K6 153 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 C12orf77C9JDV5 145 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 J3QRK9 145 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 PPIAL4GP0DN37 164 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 RCVRNP35243 200 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 GDNFP39905 211 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 GLP1RP43220 463 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 KIR2DS4P43632 304 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 KIR2DS1Q14954 304 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 HMGN3Q15651 99 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 BAK1Q16611 211 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 LYSMD2Q8IV50 215 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 BEST4Q8NFU0 473 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 MAFIPQ8WZ33 124 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 SNAPC3Q92966 411 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 LINC00574Q9H8X3 128 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 TAF9BQ9HBM6 251 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 ZNF286AQ9HBT8 521 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 KCNIP1Q9NZI2 227 aa10.33□□□□□ -0.76
PDPN-210ENST00000513143 ZNF107Q9UII5 783 aaPredicted RBP10.33□□□□□ -0.76
PDPN-210ENST00000513143 CREBBPQ92793 2442 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 IGKV1D-8A0A087WSZ0 117 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 IGHV2-70DA0A0C4DH43 119 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 KBTBD11-OT1A0A1B0GTJ5 212 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 A0A1W2PQ09 198 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 ZNF729A6NN14 1252 aaPredicted RBP10.32□□□□□ -0.76
PDPN-210ENST00000513143 B4DSR2 109 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 C15orf65H3BRN8 121 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 ENSAO43768 121 aaKnown RBP10.32□□□□□ -0.76
PDPN-210ENST00000513143 FCER2P06734 321 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 LIPFP07098 398 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 SCTP09683 121 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 ZNF728P0DKX0 622 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 SSTR5P35346 364 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 DLX6P56179 175 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 HLA-DRB3P79483 266 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 C17orf58Q2M2W7 97 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 OR52W1Q6IF63 320 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 MAPK1IP1LQ8NDC0 245 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 ZNF714Q96N38 554 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 GAL3ST2Q9H3Q3 398 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 TAS2R8Q9NYW2 309 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 CALYQ9NYX4 217 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 ANXA10Q9UJ72 324 aa10.32□□□□□ -0.76
PDPN-210ENST00000513143 A0A1W2PPH5 198 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 ANKRD20A5PA0PJZ0 165 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 C17orf98A8MV24 154 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 NPIPB11E5RHQ5 1161 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 FABP7O15540 132 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 MSMBP08118 114 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 CSF1P09603 554 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 GSTT2P0CG29 244 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 GSTT2BP0CG30 244 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 IL7P13232 177 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 CCL3L1P16619 93 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 TMEM249Q2WGJ8 235 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 C5orf24Q7Z6I8 188 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 CIARTQ8N365 385 aaPredicted RBP10.31□□□□□ -0.76
PDPN-210ENST00000513143 C11orf42Q8N5U0 333 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 LINC01356Q8N9X3 169 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 TMEM229BQ8NBD8 167 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 OR5AP2Q8NGF4 316 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 OR4A4PQ8NGN8 299 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 ARL11Q969Q4 196 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 AKAP9Q99996 3911 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 LPAR2Q9HBW0 351 aa10.31□□□□□ -0.76
PDPN-210ENST00000513143 RAB9BQ9NP90 201 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms