RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 UGT2B15P54855 530 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 SH3BGRP55822 239 aaPredicted RBP2.99□□□□□ -1.93
HTT-210ENST00000512909 SMIM11AP58511 58 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 RPL18Q07020 188 aaKnown RBP2.99□□□□□ -1.93
HTT-210ENST00000512909 MICBQ29980 383 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 SLC36A2Q495M3 483 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 DMRTC1Q5HYR2 192 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 CYB5R2Q6BCY4 276 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 ZNF544Q6NX49 715 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 UNQ9370/PRO34162Q6UXP9 181 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 ARPINQ7Z6K5 226 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 CALHM3Q86XJ0 350 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 TGIF2LXQ8IUE1 241 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 DEFB107AQ8IZN7 70 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 CEND1Q8N111 149 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 SLC22A24Q8N4F4 322 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 OR52I1Q8NGK6 324 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 OR56B4Q8NH76 319 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 OR6X1Q8NH79 312 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 C11orf40Q8WZ69 217 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 STMN2Q93045 179 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 PELI1Q96FA3 418 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 PRSS27Q9BQR3 290 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 RSPO3Q9BXY4 272 aaPredicted RBP2.99□□□□□ -1.93
HTT-210ENST00000512909 BEX2Q9BXY8 128 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 NDEL1Q9GZM8 345 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 B3GNT2Q9NY97 397 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 GLTPQ9NZD2 209 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 TAAR3PQ9P1P4 343 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 NUFIP1Q9UHK0 495 aaKnown RBP2.99□□□□□ -1.93
HTT-210ENST00000512909 ZNF229Q9UJW7 825 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 POLR1DQ9Y2S0 133 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 ARL2BPQ9Y2Y0 163 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 CDH10Q9Y6N8 788 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 BOD1L1Q8NFC6 3051 aa2.99□□□□□ -1.93
HTT-210ENST00000512909 SETXQ7Z333 2677 aaKnown RBP2.99□□□□□ -1.93
HTT-210ENST00000512909 FLNBO75369 2602 aaKnown RBP2.99□□□□□ -1.93
HTT-210ENST00000512909 ARPC4-TTLL3A0A0A6YYG9 625 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 IGHV2OR16-5A0A0B4J2B6 119 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 LOC102725191A0A1B0GVB3 256 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 C5orf49A4QMS7 147 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 CCDC182A6NF36 153 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 C12orf71A8MTZ7 269 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 RPL36A-HNRNPH2H7BZ11 118 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 H7C1C5 153 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 NME4O00746 187 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 TRAF3IP2O43734 574 aaPredicted RBP2.98□□□□□ -1.93
HTT-210ENST00000512909 SLC16A7O60669 478 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 USF1P22415 310 aaPredicted RBP2.98□□□□□ -1.93
HTT-210ENST00000512909 SLC2A5P22732 501 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 COL8A2P25067 703 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 SRP14P37108 136 aaKnown RBP2.98□□□□□ -1.93
HTT-210ENST00000512909 IFNGR2P38484 337 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 RBM34P42696 430 aaKnown RBP2.98□□□□□ -1.93
HTT-210ENST00000512909 GLP1RP43220 463 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 MNAT1P51948 309 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 RPS23P62266 143 aaKnown RBP2.98□□□□□ -1.93
HTT-210ENST00000512909 LCN6P62502 163 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 GLO1Q04760 184 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 PRKCDQ05655 676 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 MAD2L1BPQ15013 274 aaPredicted RBP2.98□□□□□ -1.93
HTT-210ENST00000512909 ZMYND11Q15326 602 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 MOGQ16653 247 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 TBC1D28Q2M2D7 210 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 ZBED5Q49AG3 693 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 COQ5Q5HYK3 327 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 PABPC1L2AQ5JQF8 200 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 THEM4Q5T1C6 240 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 OTPQ5XKR4 325 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 ARL9Q6T311 187 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 C6orf89Q6UWU4 347 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 MBOAT2Q6ZWT7 520 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 HDDC2Q7Z4H3 204 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 FAM220AQ7Z4H9 259 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 LRP11Q86VZ4 500 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 Q8N7P7 452 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 SLC30A7Q8NEW0 376 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 OR13C2Q8NGS9 318 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 AKR7LQ8NHP1 331 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 SYNPRQ8TBG9 265 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 FANK1Q8TC84 345 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 MAGEE2Q8TD90 523 aaPredicted RBP2.98□□□□□ -1.93
HTT-210ENST00000512909 GEMIN6Q8WXD5 167 aaKnown RBP2.98□□□□□ -1.93
HTT-210ENST00000512909 ACOT11Q8WXI4 607 aaPredicted RBP2.98□□□□□ -1.93
HTT-210ENST00000512909 PIGCQ92535 297 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 EMG1Q92979 244 aaKnown RBP2.98□□□□□ -1.93
HTT-210ENST00000512909 TMEM54Q969K7 222 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 PYURFQ96I23 114 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 PRRC1Q96M27 445 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 ERMAPQ96PL5 475 aaPredicted RBP2.98□□□□□ -1.93
HTT-210ENST00000512909 ZNF317Q96PQ6 595 aaPredicted RBP2.98□□□□□ -1.93
HTT-210ENST00000512909 SLC19A3Q9BZV2 496 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 TXNIPQ9H3M7 391 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 GORASP2Q9H8Y8 452 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 NMNAT1Q9HAN9 279 aaPredicted RBP2.98□□□□□ -1.93
HTT-210ENST00000512909 PLSCR3Q9NRY6 295 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 CA10Q9NS85 328 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 STX18Q9P2W9 335 aaKnown RBP2.98□□□□□ -1.93
HTT-210ENST00000512909 UGT2A1Q9Y4X1 527 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 TIMM10BQ9Y5J6 103 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms